RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 OTX2P32243 289 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 MFSD13AQ14CX5 517 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 ZNF227Q86WZ6 799 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 OR4D6Q8NGJ1 314 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 RNF128Q8TEB7 428 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 MARVELD3Q96A59 401 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 GINS4Q9BRT9 223 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 ZNF160Q9HCG1 818 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 HS3ST3B1Q9Y662 390 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 NCOR2Q9Y618 2525 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 SMG1Q96Q15 3661 aaKnown RBP8.43□□□□□ -1.06
CUX1-206ENST00000437600 TRBV5-7A0A0A0MS05 114 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 ANKRD20A5PA0PJZ0 165 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 LINC00862A6NCI5 91 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 TMEM235A6NFC5 223 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 GGT3PA6NGU5 568 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 OR6C76A6NM76 312 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 RER1O15258 196 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 ZFAND5O76080 213 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 PER3P56645 1201 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 RASGEF1BQ0VAM2 473 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 IL11RAQ14626 422 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 ANKRD39Q53RE8 183 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 KCTD18Q6PI47 426 aaPredicted RBP8.43□□□□□ -1.06
CUX1-206ENST00000437600 FGD2Q7Z6J4 655 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 GVQW1Q8N7I0 195 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 ZNF680Q8NEM1 530 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 OR10Z1Q8NGY1 313 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 LHFPL5Q8TAF8 219 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 C11orf40Q8WZ69 217 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 OR2M2Q96R28 347 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 SLC5A6Q9Y289 635 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 DNAJC13O75165 2243 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 LOC107986453A0A1B0GWG9 222 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 A0A1W2PQD3 144 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 G3V3Q6 166 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 LINC01387J3KSC0 135 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 OR2T1O43869 369 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 STK17BO94768 372 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 MT-ATP6P00846 226 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 ABOP16442 354 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 DNASE1L1P49184 302 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 TSPAN5P62079 268 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 DYRK1AQ13627 763 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 PCOLCEQ15113 449 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 SCGB2B2Q4G0G5 96 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 SFRP5Q5T4F7 317 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 HES3Q5TGS1 186 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 TEX261Q6UWH6 196 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 CHMP1BQ7LBR1 199 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 OR52N4Q8NGI2 321 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 NPRL2Q8WTW4 380 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 ZNF436Q9C0F3 470 aaPredicted RBP8.42□□□□□ -1.06
CUX1-206ENST00000437600 TINAGL1Q9GZM7 467 aaPredicted RBP8.42□□□□□ -1.06
CUX1-206ENST00000437600 TMEM138Q9NPI0 162 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 SERINC1Q9NRX5 453 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 OR52A1Q9UKL2 312 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 LOXL2Q9Y4K0 774 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 U3KQ87 197 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 DOCK10Q96BY6 2186 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 A0A1B0GVI7 797 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 POM121CA8CG34 1229 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 C9J4A7 227 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 ACOT7O00154 380 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 DLL1O00548 723 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 XRCC3O43542 346 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 GSTZ1O43708 216 aaPredicted RBP8.42□□□□□ -1.06
CUX1-206ENST00000437600 H2BFMP0C1H6 154 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 TCN2P20062 427 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 POU3F2P20265 443 aaPredicted RBP8.42□□□□□ -1.06
CUX1-206ENST00000437600 CSRP1P21291 193 aaKnown RBP8.42□□□□□ -1.06
CUX1-206ENST00000437600 CAPZA2P47755 286 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 PSMA6P60900 246 aaKnown RBP8.42□□□□□ -1.06
CUX1-206ENST00000437600 ZMYND11Q15326 602 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 TEX30Q5JUR7 227 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 ZNF468Q5VIY5 522 aaPredicted RBP8.42□□□□□ -1.06
CUX1-206ENST00000437600 CD276Q5ZPR3 534 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 OR52W1Q6IF63 320 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 LIN54Q6MZP7 749 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 NUP54Q7Z3B4 507 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 TIPARPQ7Z3E1 657 aaKnown RBP8.42□□□□□ -1.06
CUX1-206ENST00000437600 CHST4Q8NCG5 386 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 OR52N5Q8NH56 324 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 TMEM234Q8WY98 164 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 ZNF319Q9P2F9 582 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 POLR1DQ9Y2S0 133 aa8.42□□□□□ -1.06
CUX1-206ENST00000437600 COL5A1P20908 1838 aaPredicted RBP8.42□□□□□ -1.06
CUX1-206ENST00000437600 A0A1W2PP11 408 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 SULT1B1O43704 296 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 RAB40ALP0C0E4 278 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 SULT1A3P0DMM9 295 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 SULT1A4P0DMN0 295 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 CALCBP10092 127 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 HTR2CP28335 458 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 RAB11BQ15907 218 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 DCAF12L2Q5VW00 463 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 PLXDC2Q6UX71 529 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 CFAP77Q6ZQR2 320 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 RAB11FIP2Q7L804 512 aa8.41□□□□□ -1.06
CUX1-206ENST00000437600 LRRC18Q8N456 261 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms