RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 PRSS35Q8N3Z0 413 aa20.04■□□□□ 0.8
CPSF4-204ENST00000436336 STEAP2Q8NFT2 490 aa20.04■□□□□ 0.8
CPSF4-204ENST00000436336 DOK1Q99704 481 aa20.04■□□□□ 0.8
CPSF4-204ENST00000436336 ERRFI1Q9UJM3 462 aaPredicted RBP20.04■□□□□ 0.8
CPSF4-204ENST00000436336 NBASA2RRP1 2371 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 IQCMA0A1B0GVH7 501 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 M0R135 149 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 GPRIN2O60269 458 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 TPTEP56180 551 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 FAM27E3Q08E93 113 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 TRAM1Q15629 374 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 TIMM23BQ5SRD1 257 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 C1QTNF12Q5T7M4 302 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 SLC7A6Q92536 515 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 GHSRQ92847 366 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 ZNF799Q96GE5 643 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 ZNF75AQ96N20 296 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 USB1Q9BQ65 265 aaKnown RBP20.03■□□□□ 0.8
CPSF4-204ENST00000436336 FAM192AQ9GZU8 254 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 G6PC2Q9NQR9 355 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 ENPP5Q9UJA9 477 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 OR52A1Q9UKL2 312 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 GTF2A1LQ9UNN4 478 aa20.03■□□□□ 0.8
CPSF4-204ENST00000436336 A0A1W2PR80 420 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 OR4C45A6NMZ5 311 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 C1QL1O75973 258 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 DBHP09172 617 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 GADD45AP24522 165 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 KIR3DL2P43630 455 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 ASCL1P50553 236 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 TMBIM6P55061 237 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 ZNF121P58317 390 aaPredicted RBP20.02■□□□□ 0.8
CPSF4-204ENST00000436336 RPS25P62851 125 aaKnown RBP20.02■□□□□ 0.8
CPSF4-204ENST00000436336 TIMM50Q3ZCQ8 353 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 DRAM2Q6UX65 266 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 ZNF584Q8IVC4 421 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 IL17RDQ8NFM7 739 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 OR5AK2Q8NH90 309 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 ZNF420Q8TAQ5 688 aaPredicted RBP20.02■□□□□ 0.8
CPSF4-204ENST00000436336 S100PBPQ96BU1 408 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 STUB1Q9UNE7 303 aa20.02■□□□□ 0.8
CPSF4-204ENST00000436336 KMT2BQ9UMN6 2715 aaPredicted RBP20.02■□□□□ 0.79
CPSF4-204ENST00000436336 CCDC160A6NGH7 325 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 ACOD1A6NK06 481 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 TMEM212A6NML5 194 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 ZFPL1O95159 310 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 SERPINA5P05154 406 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 PAX7P23759 505 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 STOMP27105 288 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 APEX1P27695 318 aaKnown RBP20.02■□□□□ 0.79
CPSF4-204ENST00000436336 MS4A15Q8N5U1 240 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 PDCD1LG2Q9BQ51 273 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 TMED9Q9BVK6 235 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 NAA50Q9GZZ1 169 aaKnown RBP20.02■□□□□ 0.79
CPSF4-204ENST00000436336 COMMD4Q9H0A8 199 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 OR10A4Q9H209 315 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 BRD7Q9NPI1 651 aa20.02■□□□□ 0.79
CPSF4-204ENST00000436336 C16orf97H3BN30 126 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 GABARAPO95166 117 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 ACSM4P0C7M7 580 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 CBR1P16152 277 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 SLC6A9P48067 706 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 BCL2L15Q5TBC7 163 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 SLC16A12Q6ZSM3 486 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 PRSS45Q7RTY3 260 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 LILRB4Q8NHJ6 448 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 RAB2BQ8WUD1 216 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 TMEM203Q969S6 136 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 ACTR6Q9GZN1 396 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 PBOV1Q9GZY1 135 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 OR51E2Q9H255 320 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 MOV10Q9HCE1 1003 aaKnown RBP20.01■□□□□ 0.79
CPSF4-204ENST00000436336 NUFIP1Q9UHK0 495 aaKnown RBP20.01■□□□□ 0.79
CPSF4-204ENST00000436336 SLC22A13Q9Y226 551 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 ZNF281Q9Y2X9 895 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 SLC25A15Q9Y619 301 aa20.01■□□□□ 0.79
CPSF4-204ENST00000436336 AIREO43918 545 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 NOL3O60936 208 aaKnown RBP20■□□□□ 0.79
CPSF4-204ENST00000436336 HLA-DPB1P04440 258 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 ANXA2P07355 339 aaKnown RBP20■□□□□ 0.79
CPSF4-204ENST00000436336 ZNF14P17017 642 aaPredicted RBP20■□□□□ 0.79
CPSF4-204ENST00000436336 APLNRP35414 380 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 UGT2B10P36537 528 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 FBXL19-AS1Q494R0 122 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 FOXB2Q5VYV0 432 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 CD200R1LQ6Q8B3 271 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 ZNF676Q8N7Q3 588 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 PPP1R14AQ96A00 147 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 DCLRE1CQ96SD1 692 aaKnown RBP20■□□□□ 0.79
CPSF4-204ENST00000436336 BCL7BQ9BQE9 202 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 RTTNQ86VV8 2226 aa20■□□□□ 0.79
CPSF4-204ENST00000436336 LOC100509620A0A075B734 347 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 ZNF701M0R085 212 aaPredicted RBP19.99■□□□□ 0.79
CPSF4-204ENST00000436336 IGKV3-15P01624 115 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 CRYBB2P43320 205 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 YIF1BQ5BJH7 314 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 ZNF704Q6ZNC4 412 aaPredicted RBP19.99■□□□□ 0.79
CPSF4-204ENST00000436336 GDPGP1Q6ZNW5 385 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 NAA40Q86UY6 237 aa19.99■□□□□ 0.79
CPSF4-204ENST00000436336 ELMOD2Q8IZ81 293 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms