RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 ZNF679Q8IYX0 411 aa13.26□□□□□ -0.29
CNOT9-205ENST00000433439 ZNF295-AS1Q8N0V1 137 aa13.26□□□□□ -0.29
CNOT9-205ENST00000433439 SGCDQ92629 289 aa13.26□□□□□ -0.29
CNOT9-205ENST00000433439 ALG8Q9BVK2 526 aa13.26□□□□□ -0.29
CNOT9-205ENST00000433439 CCDC90BQ9GZT6 254 aa13.26□□□□□ -0.29
CNOT9-205ENST00000433439 PKDREJQ9NTG1 2253 aa13.26□□□□□ -0.29
CNOT9-205ENST00000433439 ERVK13-1Q9NX77 482 aa13.26□□□□□ -0.29
CNOT9-205ENST00000433439 CNOT2Q9NZN8 540 aaKnown RBP13.26□□□□□ -0.29
CNOT9-205ENST00000433439 MRM2Q9UI43 246 aaKnown RBP13.26□□□□□ -0.29
CNOT9-205ENST00000433439 ATPIF1Q9UII2 106 aa13.26□□□□□ -0.29
CNOT9-205ENST00000433439 LRRC42Q9Y546 428 aa13.26□□□□□ -0.29
CNOT9-205ENST00000433439 RTTNQ86VV8 2226 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 TBX1O43435 398 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 SMPD2O60906 423 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 CTAG2O75638 210 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 NGFP01138 241 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 IGHA1P01876 353 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 CCDC159P0C7I6 412 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 PIPP12273 146 aaPredicted RBP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 CRHBPP24387 322 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 C21orf33P30042 268 aaPredicted RBP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 ETV1P50549 477 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 UCP2P55851 309 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 ERVS71-1P61550 626 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 EGR3Q06889 387 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 RBM48Q5RL73 367 aaKnown RBP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 SPATA46Q5T0L3 261 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 FAM57BQ71RH2 274 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 ZNF101Q8IZC7 436 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 OR1J1Q8NGS3 322 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 AKAP1Q92667 903 aaKnown RBP eCLIP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 MYDGFQ969H8 173 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 MRPL48Q96GC5 212 aaKnown RBP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 C4orf36Q96KX1 117 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 CLEC4MQ9H2X3 399 aaPredicted RBP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 UBTD1Q9HAC8 227 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 PAK1IP1Q9NWT1 392 aaPredicted RBP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 ERVK-18Q9QC07 812 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 BLOC1S6Q9UL45 172 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 FZR1Q9UM11 496 aa13.25□□□□□ -0.29
CNOT9-205ENST00000433439 DIMT1Q9UNQ2 313 aaKnown RBP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 EXOSC1Q9Y3B2 195 aaKnown RBP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 ANKHD1Q8IWZ3 2542 aaKnown RBP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 TEP1Q99973 2627 aaKnown RBP13.25□□□□□ -0.29
CNOT9-205ENST00000433439 CADP27708 2225 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 A0A1W2PPR1 153 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 METTL15A6NJ78 407 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 GPRIN2O60269 458 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 ZNF254O75437 659 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 NR4A1P22736 598 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 PSMB10P40306 273 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 RAD52P43351 418 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 OR12D2P58182 307 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 ZNF121P58317 390 aaPredicted RBP13.24□□□□□ -0.29
CNOT9-205ENST00000433439 PPP1CBP62140 327 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 ROM1Q03395 351 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 GALEQ14376 348 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 OR2G6Q5TZ20 316 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 DRAM2Q6UX65 266 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 RFPL4BQ6ZWI9 263 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 PGAM5Q96HS1 289 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 DCLRE1CQ96SD1 692 aaKnown RBP13.24□□□□□ -0.29
CNOT9-205ENST00000433439 DOK1Q99704 481 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 TMEM204Q9BSN7 226 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 INPP5EQ9NRR6 644 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 ACOXLQ9NUZ1 547 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 CISD1Q9NZ45 108 aaKnown RBP13.24□□□□□ -0.29
CNOT9-205ENST00000433439 PTTG3PQ9NZH4 202 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 CLEC2DQ9UHP7 191 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 TEX15Q9BXT5 2789 aa13.24□□□□□ -0.29
CNOT9-205ENST00000433439 TMEM269A0A1B0GVZ9 245 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 E7EQL1 145 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 LOC110117498-PIK3R3F6TDL0 507 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 RGS10O43665 173 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 GOSR1O95249 250 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 APOC1P02654 83 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 CDK1P06493 297 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 LIMS3P0CW19 117 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 LIMS4P0CW20 117 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 PCSK6P29122 969 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 THBS4P35443 961 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 ACTA2P62736 377 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 ACTG2P63267 376 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 SLC35A2P78381 396 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 GFOD2Q3B7J2 385 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 ZNF829Q3KNS6 432 aaPredicted RBP13.23□□□□□ -0.29
CNOT9-205ENST00000433439 KRTAP27-1Q3LI81 207 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 CDONQ4KMG0 1287 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 LIPNQ5VXI9 398 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 DEGS2Q6QHC5 323 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 UNQ6126/PRO20091Q6UXV3 157 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 RHOUQ7L0Q8 258 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 KLHL36Q8N4N3 616 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 LILRB1Q8NHL6 650 aaPredicted RBP13.23□□□□□ -0.29
CNOT9-205ENST00000433439 SLC25A40Q8TBP6 338 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 SPRYD4Q8WW59 207 aaPredicted RBP13.23□□□□□ -0.29
CNOT9-205ENST00000433439 IPCEF1Q8WWN9 437 aaPredicted RBP13.23□□□□□ -0.29
CNOT9-205ENST00000433439 APOBEC3DQ96AK3 386 aaPredicted RBP13.23□□□□□ -0.29
CNOT9-205ENST00000433439 BCL2L14Q9BZR8 327 aa13.23□□□□□ -0.29
CNOT9-205ENST00000433439 NIPAL2Q9H841 368 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms