RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 ITLN1Q8WWA0 313 aa7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 GCDHQ92947 438 aaPredicted RBP7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 PTP4A1Q93096 173 aa7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 POP5Q969H6 163 aaKnown RBP7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 ZMYND19Q96E35 227 aaPredicted RBP7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 DCLRE1CQ96SD1 692 aaKnown RBP7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 GPA33Q99795 319 aa7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 NUAK2Q9H093 628 aa7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 PATZ1Q9HBE1 687 aaKnown RBP7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 GCM1Q9NP62 436 aa7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 DCAF13Q9NV06 445 aaKnown RBP7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 IL20RAQ9UHF4 553 aa7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 PPP1R3CQ9UQK1 317 aa7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 IER3IP1Q9Y5U9 82 aa7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 LHFPL6Q9Y693 200 aa7.91□□□□□ -1.14
CDC42-IT1-201ENST00000431803 IGLV1-36A0A0B4J1U3 117 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 UNC119BA6NIH7 251 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 TMEM178BH3BS89 294 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 IFNL4K9M1U5 179 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 DCTN6O00399 190 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 GPANK1O95872 356 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 SEMG1P04279 462 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 ZNF12P17014 697 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 FPR2P25090 351 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 MDH1P40925 334 aaKnown RBP7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 MDH2P40926 338 aaKnown RBP7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 PSME3P61289 254 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 UBA52P62987 128 aaKnown RBP7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 PAX2Q02962 417 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 COX10Q12887 443 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 ZNF154Q13106 437 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 HLXQ14774 488 aaPredicted RBP7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 KRTAP27-1Q3LI81 207 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 KLF17Q5JT82 389 aaPredicted RBP7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 C1orf94Q6P1W5 598 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 PGM2L1Q6PCE3 622 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 SMARCD3Q6STE5 483 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 COLCA1Q6ZS62 124 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 C3orf56Q8N813 242 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 GJC3Q8NFK1 279 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 OR10AD1Q8NGE0 317 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 C22orf15Q8WYQ4 148 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 APOBEC3DQ96AK3 386 aaPredicted RBP7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 CMTM5Q96DZ9 223 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 TSSK2Q96PF2 358 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 COQ7Q99807 217 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 HDHD2Q9H0R4 259 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 MYLK2Q9H1R3 596 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 RERGLQ9H628 205 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 NTN4Q9HB63 628 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 SPAG4Q9NPE6 437 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 KRCC1Q9NPI7 259 aaPredicted RBP7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 SAMD4AQ9UPU9 718 aaKnown RBP7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 FAM32AQ9Y421 112 aaKnown RBP7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 INSIG2Q9Y5U4 225 aa7.9□□□□□ -1.14
CDC42-IT1-201ENST00000431803 CEACAM18A8MTB9 384 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 IQCF6A8MYZ5 107 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 ARPC3O15145 178 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 MLNRO43193 412 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 DIRAS1O95057 198 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 FSTL3O95633 263 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 PPP1R3DO95685 299 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 CPT2P23786 658 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 CRABP1P29762 137 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 RPS6KA3P51812 740 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 MEP1BQ16820 701 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 RSPO1Q2MKA7 263 aaPredicted RBP7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 ESCO2Q56NI9 601 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 AWAT1Q58HT5 328 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 ARMCX4Q5H9R4 360 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 GLYATQ6IB77 296 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 OR2T2Q6IF00 324 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 SLC27A4Q6P1M0 643 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 DNM1P34Q6PK57 102 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 DOK3Q7L591 496 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 ZDHHC13Q8IUH4 622 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 OR5AS1Q8N127 324 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 OR6V1Q8N148 313 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 MUC20Q8N307 709 aaPredicted RBP7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 SIGLECL1Q8N7X8 197 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 SLC26A10Q8NG04 563 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 OR8G5Q8NG78 346 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 OR5L1Q8NGL2 311 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 OR13G1Q8NGZ3 307 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 FANK1Q8TC84 345 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 DACT3Q96B18 629 aaPredicted RBP7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 SLC30A2Q9BRI3 323 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 GORASP2Q9H8Y8 452 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 MED4Q9NPJ6 270 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 PTTG3PQ9NZH4 202 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 NUP50Q9UKX7 468 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 AURKCQ9UQB9 309 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 LRCH1Q9Y2L9 728 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 POLR1DQ9Y2S0 133 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 AUP1Q9Y679 476 aa7.89□□□□□ -1.15
CDC42-IT1-201ENST00000431803 WNT2P09544 360 aa7.88□□□□□ -1.15
CDC42-IT1-201ENST00000431803 PPIAL4GP0DN37 164 aa7.88□□□□□ -1.15
CDC42-IT1-201ENST00000431803 EGR1P18146 543 aa7.88□□□□□ -1.15
CDC42-IT1-201ENST00000431803 FPR3P25089 353 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms