RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 STARD10Q9Y365 291 aa10.67□□□□□ -0.7
USP40-205ENST00000430158 IGLV3-9A0A075B6K5 115 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 RAF1P04049 648 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 MRPL3P09001 348 aaKnown RBP10.66□□□□□ -0.7
USP40-205ENST00000430158 OR4A8P0C604 315 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 CCNOP22674 350 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 SERPINF1P36955 418 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 RAD52P43351 418 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 SLC15A1P46059 708 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 EVX1P49640 407 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 FABP6P51161 128 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 SMN1Q16637 294 aaKnown RBP10.66□□□□□ -0.7
USP40-205ENST00000430158 LRP11Q86VZ4 500 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 SLC35F2Q8IXU6 374 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 MUC15Q8N387 334 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 OR51G2Q8NGK0 314 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 IPCEF1Q8WWN9 437 aaPredicted RBP10.66□□□□□ -0.7
USP40-205ENST00000430158 NINJ1Q92982 152 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 RFKQ969G6 155 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 MRPL24Q96A35 216 aaKnown RBP10.66□□□□□ -0.7
USP40-205ENST00000430158 APOL4Q9BPW4 351 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 ZNF649Q9BS31 505 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 MRPL37Q9BZE1 423 aaKnown RBP10.66□□□□□ -0.7
USP40-205ENST00000430158 BCL2L14Q9BZR8 327 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 CBLN4Q9NTU7 201 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 ZNF701Q9NV72 531 aaPredicted RBP10.66□□□□□ -0.7
USP40-205ENST00000430158 CLN6Q9NWW5 311 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 MYEF2Q9P2K5 600 aaKnown RBP10.66□□□□□ -0.7
USP40-205ENST00000430158 POU2F3Q9UKI9 436 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 EXOGQ9Y2C4 368 aaKnown RBP10.66□□□□□ -0.7
USP40-205ENST00000430158 GRIP1Q9Y3R0 1128 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 SPEF1Q9Y4P9 236 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 HSPE1-MOB4S4R3N1 261 aa10.66□□□□□ -0.7
USP40-205ENST00000430158 ZNF878C9JN71 531 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 J3QW42 95 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 APOL3O95236 402 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 ABHD16AO95870 558 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 CLPTM1O96005 669 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 LYNP07948 512 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 ADRA2AP08913 450 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 MPV17P39210 176 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 MTNR1AP48039 350 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 NUDT6P53370 316 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 PPP1CBP62140 327 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 GALK2Q01415 458 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 ZNF85Q03923 595 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 ZNF91Q05481 1191 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 C6orf52Q5T4I8 152 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 MBNL2Q5VZF2 373 aaKnown RBP10.65□□□□□ -0.7
USP40-205ENST00000430158 DEGS2Q6QHC5 323 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 VHLLQ6RSH7 139 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 SPATC1Q76KD6 591 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 SSX6Q7RTT6 188 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 CDH24Q86UP0 819 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 CNIH3Q8TBE1 160 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 SLC25A40Q8TBP6 338 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 LGALS12Q96DT0 336 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 OR8B4Q96RC9 309 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 MNTQ99583 582 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 KCNJ15Q99712 375 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 OR51B6Q9H340 312 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 ELOVL3Q9HB03 270 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 SLCO1C1Q9NYB5 712 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 ZNF319Q9P2F9 582 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.65□□□□□ -0.7
USP40-205ENST00000430158 LAMP3Q9UQV4 416 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 CMAHPQ9Y471 501 aa10.65□□□□□ -0.7
USP40-205ENST00000430158 FLNAP21333 2647 aaKnown RBP10.65□□□□□ -0.71
USP40-205ENST00000430158 VPS13CQ709C8 3753 aa10.65□□□□□ -0.71
USP40-205ENST00000430158 HIVEP1P15822 2718 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 A0A1W2PQL4 384 aaPredicted RBP10.64□□□□□ -0.71
USP40-205ENST00000430158 B9A039 149 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 F5H5K5 113 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 H3BSA7 217 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 M0R135 149 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 SRSF10O75494 262 aaKnown RBP10.64□□□□□ -0.71
USP40-205ENST00000430158 IGHV3-13P01766 116 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 OR2T7P0C7T2 308 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 DBTP11182 482 aaKnown RBP10.64□□□□□ -0.71
USP40-205ENST00000430158 TUBG1P23258 451 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 RGS6P49758 472 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 PRKXP51817 358 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 RPS23P62266 143 aaKnown RBP10.64□□□□□ -0.71
USP40-205ENST00000430158 GRB2P62993 217 aaKnown RBP10.64□□□□□ -0.71
USP40-205ENST00000430158 POU4F2Q12837 409 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 CDK5R2Q13319 367 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 ALKBH6Q3KRA9 238 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 AGAP6Q5VW22 663 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 RGS7BPQ6MZT1 257 aaPredicted RBP10.64□□□□□ -0.71
USP40-205ENST00000430158 DRAM2Q6UX65 266 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 LRRN1Q6UXK5 716 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 C1orf174Q8IYL3 243 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 FBXL14Q8N1E6 418 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 OR1J1Q8NGS3 322 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 OR2T27Q8NH04 317 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 ABHD4Q8TB40 342 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 KLF14Q8TD94 323 aaPredicted RBP10.64□□□□□ -0.71
USP40-205ENST00000430158 THEM6Q8WUY1 208 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 ASB17Q8WXJ9 295 aa10.64□□□□□ -0.71
USP40-205ENST00000430158 APOBEC3DQ96AK3 386 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms