RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 TMEM165Q9HC07 324 aa14.34□□□□□ -0.11
CPSF4-203ENST00000430038 RPRD1BQ9NQG5 326 aaKnown RBP14.34□□□□□ -0.11
CPSF4-203ENST00000430038 PPIAL4EA0A075B759 164 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 PPIAL4CA0A0B4J2A2 164 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 A0A1B0GWJ7 208 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 PPIAL4DF5H284 164 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 WNT2P09544 360 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 ACSM4P0C7M7 580 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 PPIAL4FP0DN26 164 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 ZNF12P17014 697 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 TNFRSF1AP19438 455 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 FPR3P25089 353 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 RRM2P31350 389 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 ZNF154Q13106 437 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 PGBD2Q6P3X8 592 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 SDR9C7Q8NEX9 313 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 GJC3Q8NFK1 279 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 APOBEC3DQ96AK3 386 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-203ENST00000430038 MAP6Q96JE9 813 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 ZNF48Q96MX3 618 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-203ENST00000430038 IFT27Q9BW83 186 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 PLA2G12AQ9BZM1 189 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 EGLN3Q9H6Z9 239 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 ZNF69Q9UC07 566 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 CYB5R1Q9UHQ9 305 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 ATPIF1Q9UII2 106 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 INSIG2Q9Y5U4 225 aa14.33□□□□□ -0.12
CPSF4-203ENST00000430038 CEACAM18A8MTB9 384 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 IQCF6A8MYZ5 107 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 OR10H3O60404 316 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 FOXH1O75593 365 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 TNFSF4P23510 183 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 GATA3P23771 443 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 CRABP1P29762 137 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 CD80P33681 288 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 PPP1R8Q12972 351 aaKnown RBP14.32□□□□□ -0.12
CPSF4-203ENST00000430038 MAB21L1Q13394 359 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 KRT72Q14CN4 511 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 PGAM4Q8N0Y7 254 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 OR8D4Q8NGM9 314 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 TAF15Q92804 592 aaKnown RBP eCLIP14.32□□□□□ -0.12
CPSF4-203ENST00000430038 DACT3Q96B18 629 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-203ENST00000430038 BTBD10Q9BSF8 475 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 HDHD2Q9H0R4 259 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 IL1RAPQ9NPH3 570 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 POLR1DQ9Y2S0 133 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 PPIAL4AQ9Y536 164 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 PKD1L1Q8TDX9 2849 aa14.32□□□□□ -0.12
CPSF4-203ENST00000430038 A8MXK9 166 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 F5H5K5 113 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 SLC6A6P31641 620 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 PYCR1P32322 319 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 RGS6P49758 472 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 UBA52P62987 128 aaKnown RBP14.31□□□□□ -0.12
CPSF4-203ENST00000430038 GK2Q14410 553 aaPredicted RBP14.31□□□□□ -0.12
CPSF4-203ENST00000430038 ZNF770Q6IQ21 691 aaPredicted RBP14.31□□□□□ -0.12
CPSF4-203ENST00000430038 LYPD2Q6UXB3 125 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 ZNF620Q6ZNG0 422 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 PIGWQ7Z7B1 504 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 MOGAT3Q86VF5 341 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 JAZF1Q86VZ6 243 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 KLHL36Q8N4N3 616 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 SIGLECL1Q8N7X8 197 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 CYB561A3Q8NBI2 242 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 C19orf18Q8NEA5 215 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 OR9Q2Q8NGE9 314 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 OR52E2Q8NGJ4 325 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 COG8Q96MW5 612 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 DUX5Q96PT3 197 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 TMEM246Q9BRR3 403 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 NDEL1Q9GZM8 345 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 VNN3Q9NY84 501 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 MAGEL2Q9UJ55 1249 aa14.31□□□□□ -0.12
CPSF4-203ENST00000430038 TRIM77I1YAP6 450 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 J3QW42 95 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 BHLHE40O14503 412 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 FABP3P05413 133 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 EGR1P18146 543 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 ATP6V1B2P21281 511 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 MDH2P40926 338 aaKnown RBP14.3□□□□□ -0.12
CPSF4-203ENST00000430038 HMGA2P52926 109 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 ACTG1P63261 375 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 PAX8Q06710 450 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.3□□□□□ -0.12
CPSF4-203ENST00000430038 TSPAN31Q12999 210 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 CLEC12AQ5QGZ9 265 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 ZDHHC21Q8IVQ6 265 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 DEFB107AQ8IZN7 70 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 SPICQ8N5J4 248 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 OR51L1Q8NGJ5 315 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 OR4C15Q8NGM1 316 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 OR13G1Q8NGZ3 307 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 GNPDA2Q8TDQ7 276 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 GCDHQ92947 438 aaPredicted RBP14.3□□□□□ -0.12
CPSF4-203ENST00000430038 SLCO4A1Q96BD0 722 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 NSMCE2Q96MF7 247 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 ZNF582Q96NG8 517 aaPredicted RBP14.3□□□□□ -0.12
CPSF4-203ENST00000430038 PITX2Q99697 317 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 SUCNR1Q9BXA5 334 aa14.3□□□□□ -0.12
CPSF4-203ENST00000430038 TAGLN3Q9UI15 199 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms