RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TRAV17A0A0B4J275 112 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 DNASE2O00115 360 aaPredicted RBP8.14□□□□□ -1.11
CTNND1-208ENST00000428599 WDR1O75083 606 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 SLCO2B1O94956 709 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 MBP02144 154 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 SLC19A1P41440 591 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 HYAL1Q12794 435 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 PLAC9Q5JTB6 97 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 ZNF425Q6IV72 752 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 ALKAL2Q6UX46 152 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 OR2T11Q8NH01 316 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 CLCF1Q9UBD9 225 aa8.14□□□□□ -1.11
CTNND1-208ENST00000428599 HRO43593 1189 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 S100A8P05109 93 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 AMTP48728 403 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 DEFA6Q01524 100 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 LSAMPQ13449 338 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 PYCR3Q53H96 274 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 METRNLQ641Q3 311 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 OR10K2Q6IF99 312 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 RETREG3Q86VR2 466 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 RDH5Q92781 318 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 C8orf44Q96CB5 159 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 MRGPRX1Q96LB2 322 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 SLC29A1Q99808 456 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 DUSP22Q9NRW4 184 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 CTSFQ9UBX1 484 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 STRAPQ9Y3F4 350 aaKnown RBP8.13□□□□□ -1.11
CTNND1-208ENST00000428599 IGHV3-64DA0A0J9YX35 117 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 TCRBV3S1A0A5B6 114 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 POM121BA6NF01 834 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 K7EQS6 105 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 RPL7P18124 248 aaKnown RBP8.13□□□□□ -1.11
CTNND1-208ENST00000428599 AKR1C3P42330 323 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 SPANXN5Q5MJ07 72 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 DRAM2Q6UX65 266 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 TRILQ7L0X0 811 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 SLC38A9Q8NBW4 561 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 OR52H1Q8NGJ2 320 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 TVP23CQ96ET8 276 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 TAF9BQ9HBM6 251 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 ADAMTSL1Q8N6G6 1762 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 ZNF195O14628 629 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 H2AFB1P0C5Y9 115 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 CCSMST1Q4G0I0 132 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 ARSGQ96EG1 525 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 MYEOVQ96EZ4 313 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 SARGQ9BW04 601 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 AAMDCQ9H7C9 122 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 P4HTMQ9NXG6 502 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 SLC5A6Q9Y289 635 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 LOC107986453A0A1B0GWG9 222 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 OR6C68A6NDL8 312 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 NUPL2O15504 423 aaKnown RBP8.13□□□□□ -1.11
CTNND1-208ENST00000428599 ALKBH6Q3KRA9 238 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 Q6ZNB5 142 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 SLC36A1Q7Z2H8 476 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 MVB12AQ96EY5 273 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 MRGPRX4Q96LA9 322 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 ZNF2Q9BSG1 426 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-208ENST00000428599 CGGBP1Q9UFW8 167 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-208ENST00000428599 NTNG1Q9Y2I2 539 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 FLVCR1Q9Y5Y0 555 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 MICAL3Q7RTP6 2002 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 EIF3IQ13347 325 aaKnown RBP8.13□□□□□ -1.11
CTNND1-208ENST00000428599 CCDC71Q8IV32 467 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-208ENST00000428599 ARHGEF39Q8N4T4 335 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 PXT1Q8NFP0 134 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 OR11G2Q8NGC1 345 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 OR52N1Q8NH53 320 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 PFN4Q8NHR9 129 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 GNPNAT1Q96EK6 184 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-208ENST00000428599 GON7Q9BXV9 100 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 ESRP2Q9H6T0 727 aaKnown RBP8.13□□□□□ -1.11
CTNND1-208ENST00000428599 PDFQ9HBH1 243 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 TAS2R4Q9NYW5 299 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 ASH2LQ9UBL3 628 aa8.13□□□□□ -1.11
CTNND1-208ENST00000428599 YBX2Q9Y2T7 364 aaKnown RBP8.13□□□□□ -1.11
CTNND1-208ENST00000428599 A0A1W2PNR3 127 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 FAM90A27PA6NNH2 459 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 PPIHO43447 177 aaKnown RBP8.12□□□□□ -1.11
CTNND1-208ENST00000428599 ALDOCP09972 364 aaKnown RBP8.12□□□□□ -1.11
CTNND1-208ENST00000428599 CAPZBP47756 277 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 RAB1AP62820 205 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 SHBQ15464 509 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 TMEM81Q6P7N7 255 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 TMEM182Q6ZP80 229 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-208ENST00000428599 OR52N5Q8NH56 324 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 OR2V1Q8NHB1 315 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 TMEM38AQ9H6F2 299 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 DAPP1Q9UN19 280 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 C19orf53Q9UNZ5 99 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-208ENST00000428599 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 CBR3O75828 277 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 PCSK6P29122 969 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 SOX18P35713 384 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 POM121L2Q96KW2 1035 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 Q96M85 177 aa8.12□□□□□ -1.11
CTNND1-208ENST00000428599 RYDENQ9NUL5 291 aaKnown RBP8.12□□□□□ -1.11
CTNND1-208ENST00000428599 FAM53CQ9NYF3 392 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms