RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 SHQ1Q6PI26 577 aaKnown RBP12.64□□□□□ -0.39
RTN4-210ENST00000427710 Q6ZR03 302 aa12.64□□□□□ -0.39
RTN4-210ENST00000427710 SPATC1Q76KD6 591 aa12.64□□□□□ -0.39
RTN4-210ENST00000427710 DCXRQ7Z4W1 244 aa12.64□□□□□ -0.39
RTN4-210ENST00000427710 DCLRE1CQ96SD1 692 aaKnown RBP12.64□□□□□ -0.39
RTN4-210ENST00000427710 ATF6BQ99941 703 aa12.64□□□□□ -0.39
RTN4-210ENST00000427710 OR51V1Q9H2C8 321 aa12.64□□□□□ -0.39
RTN4-210ENST00000427710 IGHV1-69-2A0A0G2JMI3 117 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 LOC100289279A0A1B0GTE1 492 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 C5orf63A6NC05 138 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 H3BSA7 217 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 ZNF593O00488 134 aaPredicted RBP12.63□□□□□ -0.39
RTN4-210ENST00000427710 MITFO75030 526 aaPredicted RBP12.63□□□□□ -0.39
RTN4-210ENST00000427710 DEAF1O75398 565 aaPredicted RBP12.63□□□□□ -0.39
RTN4-210ENST00000427710 TACSTD2P09758 323 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 ANXA8P13928 327 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 GZMKP49863 264 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 ENTPD1P49961 510 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 CHN2P52757 468 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 MVKQ03426 396 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 SLC27A4Q6P1M0 643 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 ZNF771Q7L3S4 317 aaPredicted RBP12.63□□□□□ -0.39
RTN4-210ENST00000427710 PRIMA1Q86XR5 153 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 ERI1Q8IV48 349 aaKnown RBP12.63□□□□□ -0.39
RTN4-210ENST00000427710 C1orf174Q8IYL3 243 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 OR5K1Q8NHB7 308 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 CLDND2Q8NHS1 167 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 LRTOMTQ8WZ04 291 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 PTP4A1Q93096 173 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 HAVCR1Q96D42 359 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 ZMYND19Q96E35 227 aaPredicted RBP12.63□□□□□ -0.39
RTN4-210ENST00000427710 SAP30LQ9HAJ7 183 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 CENPMQ9NSP4 180 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 DCAF16Q9NXF7 216 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 NKIRAS2Q9NYR9 191 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 KIF17Q9P2E2 1029 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 ATPIF1Q9UII2 106 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 N6AMT1Q9Y5N5 214 aa12.63□□□□□ -0.39
RTN4-210ENST00000427710 SURF4O15260 269 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 CRLF1O75462 422 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 CIB2O75838 187 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 LCATP04180 440 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 HOXB6P17509 224 aaKnown RBP12.62□□□□□ -0.39
RTN4-210ENST00000427710 KITLGP21583 273 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 PRKXP51817 358 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 TNFAIP6P98066 277 aaPredicted RBP12.62□□□□□ -0.39
RTN4-210ENST00000427710 CDK5Q00535 292 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 CDK5R2Q13319 367 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 ATP6AP1Q15904 470 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 PLBD1Q6P4A8 553 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 IL17RELQ6ZVW7 336 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 ASRGL1Q7L266 308 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 BBS1Q8NFJ9 593 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 OR2Z1Q8NG97 314 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 OR6N2Q8NGY6 317 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 APOBEC3DQ96AK3 386 aaPredicted RBP12.62□□□□□ -0.39
RTN4-210ENST00000427710 C1QTNF5Q9BXJ0 243 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 SEMA6AQ9H2E6 1030 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 KCNG2Q9UJ96 466 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 AP4S1Q9Y587 144 aa12.62□□□□□ -0.39
RTN4-210ENST00000427710 IGHV3-64DA0A0J9YX35 117 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 PRR23D1E9PI22 279 aaPredicted RBP12.61□□□□□ -0.39
RTN4-210ENST00000427710 H0YL77 283 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 M0R129 80 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 M0R135 149 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 SELENOFO60613 162 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 LMX1BO60663 402 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 TGFAP01135 160 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 PRR23D2P0DMB1 279 aaPredicted RBP12.61□□□□□ -0.39
RTN4-210ENST00000427710 SLC2A1P11166 492 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 GSTT1P30711 240 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 CRYBB2P43320 205 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 SLC6A9P48067 706 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 RGS6P49758 472 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 EIF2B1Q14232 305 aaKnown RBP12.61□□□□□ -0.39
RTN4-210ENST00000427710 SNAI3Q3KNW1 292 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 KLHL12Q53G59 568 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 FAM209AQ5JX71 171 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 FAHD1Q6P587 224 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 CCDC121Q6ZUS5 278 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 CPOQ8IVL8 374 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 BHLHE23Q8NDY6 225 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 OR5L1Q8NGL2 311 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 ITLN1Q8WWA0 313 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 CCL17Q92583 94 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 SLAMF6Q96DU3 332 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 NRBF2Q96F24 287 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 ELMOD3Q96FG2 381 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 ZNF799Q96GE5 643 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 COG8Q96MW5 612 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 AMELYQ99218 206 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 COPS4Q9BT78 406 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 MMADHCQ9H3L0 296 aaPredicted RBP12.61□□□□□ -0.39
RTN4-210ENST00000427710 PAPOLBQ9NRJ5 636 aaKnown RBP12.61□□□□□ -0.39
RTN4-210ENST00000427710 CYSLTR2Q9NS75 346 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 TVP23BQ9NYZ1 205 aa12.61□□□□□ -0.39
RTN4-210ENST00000427710 FAM157AC9JC47 383 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 GLCEO94923 617 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 RAC2P15153 192 aa12.6□□□□□ -0.39
RTN4-210ENST00000427710 IGFBP5P24593 272 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms