RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 USP51Q70EK9 711 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 OR5AS1Q8N127 324 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 ATG16L2Q8NAA4 619 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 OR2AJ1Q8NGZ0 328 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 RDH5Q92781 318 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 CMBLQ96DG6 245 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 ATF6BQ99941 703 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 CHODLQ9H9P2 273 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 KIF17Q9P2E2 1029 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 DYSFO75923 2080 aa11.59□□□□□ -0.55
SNX3-204ENST00000426155 PLSCR5A0PG75 271 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 C5orf63A6NC05 138 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 H3BSA7 217 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 TPD52L2O43399 206 aaKnown RBP11.58□□□□□ -0.56
SNX3-204ENST00000426155 DEAF1O75398 565 aaPredicted RBP11.58□□□□□ -0.56
SNX3-204ENST00000426155 IFNGP01579 166 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 ACSM4P0C7M7 580 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 ZNF3P17036 446 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 HOXB6P17509 224 aaKnown RBP11.58□□□□□ -0.56
SNX3-204ENST00000426155 ACHEP22303 614 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 FMO3P31513 532 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 DAPP51397 102 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 ELF3P78545 371 aaPredicted RBP11.58□□□□□ -0.56
SNX3-204ENST00000426155 KRTAP27-1Q3LI81 207 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 AVPI1Q5T686 147 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 SLC27A4Q6P1M0 643 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 SPATC1Q76KD6 591 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 ASRGL1Q7L266 308 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 DCXRQ7Z4W1 244 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 AMIGO2Q86SJ2 522 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 BBS1Q8NFJ9 593 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 MSI2Q96DH6 328 aaKnown RBP11.58□□□□□ -0.56
SNX3-204ENST00000426155 ZNF556Q9HAH1 456 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 SAP30LQ9HAJ7 183 aa11.58□□□□□ -0.56
SNX3-204ENST00000426155 PURGQ9UJV8 347 aaKnown RBP11.58□□□□□ -0.56
SNX3-204ENST00000426155 M0R129 80 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 SURF4O15260 269 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 PPIHO43447 177 aaKnown RBP11.57□□□□□ -0.56
SNX3-204ENST00000426155 MITFO75030 526 aaPredicted RBP11.57□□□□□ -0.56
SNX3-204ENST00000426155 ATP6V1G2O95670 118 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 MT-ND5P03915 603 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 TACSTD2P09758 323 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 ANXA8P13928 327 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 GPR6P46095 362 aaPredicted RBP11.57□□□□□ -0.56
SNX3-204ENST00000426155 RGS6P49758 472 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 ENTPD1P49961 510 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 ATP6AP1Q15904 470 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 MOGQ16653 247 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 PCGF3Q3KNV8 242 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 CYB5R2Q6BCY4 276 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 OR2T2Q6IF00 324 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 PLBD1Q6P4A8 553 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 FAHD1Q6P587 224 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 ERI1Q8IV48 349 aaKnown RBP11.57□□□□□ -0.56
SNX3-204ENST00000426155 BHLHE23Q8NDY6 225 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 LRTOMTQ8WZ04 291 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 PTP4A1Q93096 173 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 APOBEC3DQ96AK3 386 aaPredicted RBP11.57□□□□□ -0.56
SNX3-204ENST00000426155 RAB3IPQ96QF0 476 aaPredicted RBP11.57□□□□□ -0.56
SNX3-204ENST00000426155 DCLRE1CQ96SD1 692 aaKnown RBP11.57□□□□□ -0.56
SNX3-204ENST00000426155 OR51V1Q9H2C8 321 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 MMADHCQ9H3L0 296 aaPredicted RBP11.57□□□□□ -0.56
SNX3-204ENST00000426155 DECR2Q9NUI1 292 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 DCAF16Q9NXF7 216 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 NKIRAS2Q9NYR9 191 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 KCNG2Q9UJ96 466 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 JMJD1CQ15652 2540 aa11.57□□□□□ -0.56
SNX3-204ENST00000426155 IGHV1-69-2A0A0G2JMI3 117 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 A8MV72 311 aaPredicted RBP11.56□□□□□ -0.56
SNX3-204ENST00000426155 M0R135 149 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 ZNF593O00488 134 aaPredicted RBP11.56□□□□□ -0.56
SNX3-204ENST00000426155 TLX2O43763 284 aaPredicted RBP11.56□□□□□ -0.56
SNX3-204ENST00000426155 CIB2O75838 187 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 KITLGP21583 273 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 CRYBB2P43320 205 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 CHN2P52757 468 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 CDK5Q00535 292 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 MVKQ03426 396 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 SNAI3Q3KNW1 292 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 COLCA1Q6ZS62 124 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 IL17RELQ6ZVW7 336 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 C1orf174Q8IYL3 243 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 ZNF540Q8NDQ6 660 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 OR2Z1Q8NG97 314 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 OR6N2Q8NGY6 317 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 OR5K1Q8NHB7 308 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 CLDND2Q8NHS1 167 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 ST7LQ8TDW4 575 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 HAVCR1Q96D42 359 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 SLAMF6Q96DU3 332 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 ZMYND19Q96E35 227 aaPredicted RBP11.56□□□□□ -0.56
SNX3-204ENST00000426155 ZNF799Q96GE5 643 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 AMELYQ99218 206 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 C1QTNF5Q9BXJ0 243 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 SEMA6AQ9H2E6 1030 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 PAPOLBQ9NRJ5 636 aaKnown RBP11.56□□□□□ -0.56
SNX3-204ENST00000426155 DDX28Q9NUL7 540 aaKnown RBP11.56□□□□□ -0.56
SNX3-204ENST00000426155 AP4S1Q9Y587 144 aa11.56□□□□□ -0.56
SNX3-204ENST00000426155 LOC100289279A0A1B0GTE1 492 aa11.55□□□□□ -0.56
SNX3-204ENST00000426155 PRR23D1E9PI22 279 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms