RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 A0A096LNT2 108 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 IGHV4-61A0A0C4DH41 118 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 INAFM1C9JVW0 142 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 G3V2T6 193 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 ZNF593O00488 134 aaPredicted RBP9.33□□□□□ -0.92
USP49-204ENST00000423567 PPIHO43447 177 aaKnown RBP9.33□□□□□ -0.92
USP49-204ENST00000423567 SPRY3O43610 288 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 CDC14BO60729 498 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 NCR1O76036 304 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 LCATP04180 440 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 RAC2P15153 192 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 ZNF23P17027 643 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 COL8A2P25067 703 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 SLC6A9P48067 706 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 MMP15P51511 669 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 MALLQ13021 153 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 PSG7Q13046 419 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 RIN1Q13671 783 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 CCNIQ14094 377 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 HFEQ30201 348 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 ASRGL1Q7L266 308 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 ZDHHC13Q8IUH4 622 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 C10orf67Q8IYJ2 551 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 LINC00528Q8N1L1 170 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 ELMOD3Q96FG2 381 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 DUS3LQ96G46 650 aaKnown RBP9.33□□□□□ -0.92
USP49-204ENST00000423567 COPS4Q9BT78 406 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 HCAR1Q9BXC0 346 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 OR51V1Q9H2C8 321 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 WDR76Q9H967 626 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 NTN4Q9HB63 628 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 PTTG3PQ9NZH4 202 aa9.33□□□□□ -0.92
USP49-204ENST00000423567 PURGQ9UJV8 347 aaKnown RBP9.33□□□□□ -0.92
USP49-204ENST00000423567 IGHV1-69-2A0A0G2JMI3 117 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 ZSCAN5BA6NJL1 495 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 FAM183AA6NL82 134 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 A8MV72 311 aaPredicted RBP9.32□□□□□ -0.92
USP49-204ENST00000423567 M0R135 149 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 SURF4O15260 269 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 GLCEO94923 617 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 IGHV1-46P01743 117 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 ADH4P08319 380 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 ACSM4P0C7M7 580 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 CLUP10909 449 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 SELEP16581 610 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 KITLGP21583 273 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 GSTT1P30711 240 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 RPS27P42677 84 aaKnown RBP9.32□□□□□ -0.92
USP49-204ENST00000423567 CRYBB2P43320 205 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 SLC15A1P46059 708 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 CRISP1P54107 249 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 RPS7P62081 194 aaKnown RBP9.32□□□□□ -0.92
USP49-204ENST00000423567 ESRRGP62508 458 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 CDK5Q00535 292 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 KRTAP1-1Q07627 177 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 SLC3A1Q07837 685 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 SNAPC1Q16533 368 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 KLHL12Q53G59 568 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 TEX30Q5JUR7 227 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 ACSM5Q6NUN0 579 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 PLBD1Q6P4A8 553 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 FAHD1Q6P587 224 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 LYPD4Q6UWN0 246 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 FBXW12Q6X9E4 464 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 USP51Q70EK9 711 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 SHFQ7M4L6 423 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 DCXRQ7Z4W1 244 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 ERI1Q8IV48 349 aaKnown RBP9.32□□□□□ -0.92
USP49-204ENST00000423567 PARP8Q8N3A8 854 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 OR6N2Q8NGY6 317 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 ZNRF4Q8WWF5 429 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 GTF3AQ92664 365 aaKnown RBP9.32□□□□□ -0.92
USP49-204ENST00000423567 HAVCR1Q96D42 359 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 ZNF799Q96GE5 643 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 TIMD4Q96H15 378 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 MAP6Q96JE9 813 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 ZNF582Q96NG8 517 aaPredicted RBP9.32□□□□□ -0.92
USP49-204ENST00000423567 INTS14Q96SY0 518 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 POFUT1Q9H488 388 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 MED20Q9H944 212 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 SLC25A19Q9HC21 320 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 MSL2Q9HCI7 577 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 PNRC2Q9NPJ4 139 aaKnown RBP9.32□□□□□ -0.92
USP49-204ENST00000423567 KRT84Q9NSB2 600 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 ZNF275Q9NSD4 429 aaPredicted RBP9.32□□□□□ -0.92
USP49-204ENST00000423567 CENPMQ9NSP4 180 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 TVP23BQ9NYZ1 205 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 VPS13CQ709C8 3753 aa9.32□□□□□ -0.92
USP49-204ENST00000423567 ZNF469Q96JG9 3925 aaPredicted RBP9.31□□□□□ -0.92
USP49-204ENST00000423567 HIVEP2P31629 2446 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 LOC100289279A0A1B0GTE1 492 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 CLDN25C9JDP6 229 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 ZNF878C9JN71 531 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 PRODHO43272 600 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 TACSTD2P09758 323 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 IGHV4-31P0DP07 118 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 ZNF16P17020 682 aaPredicted RBP9.31□□□□□ -0.92
USP49-204ENST00000423567 TNFRSF1AP19438 455 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 DAPP51397 102 aa9.31□□□□□ -0.92
USP49-204ENST00000423567 GRB2P62993 217 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms