RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 COQ7Q99807 217 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 C1QTNF5Q9BXJ0 243 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 NUAK2Q9H093 628 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 DCAF13Q9NV06 445 aaKnown RBP13.55□□□□□ -0.24
COL18A1-205ENST00000423214 MIOXQ9UGB7 285 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 TAGLN3Q9UI15 199 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 IER3IP1Q9Y5U9 82 aa13.55□□□□□ -0.24
COL18A1-205ENST00000423214 MEGF8Q7Z7M0 2845 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 IGHV3OR16-10A0A075B7F0 116 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 TRAV40A0A0B4J280 105 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 A0A1W2PRQ8 180 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 GMNNO75496 209 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 ZNF205O95201 554 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 RNASE1P07998 156 aaKnown RBP13.54□□□□□ -0.24
COL18A1-205ENST00000423214 CPT2P23786 658 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 DGCR6Q14129 220 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 PRR31Q5SQ13 230 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 LRRN1Q6UXK5 716 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 PTCHD4Q6ZW05 846 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 NLRC3Q7RTR2 1065 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 MOGAT3Q86VF5 341 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 JAZF1Q86VZ6 243 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 KLBQ86Z14 1044 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 GJC3Q8NFK1 279 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 FANK1Q8TC84 345 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 NEIL1Q96FI4 390 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-205ENST00000423214 ZNF48Q96MX3 618 aaPredicted RBP13.54□□□□□ -0.24
COL18A1-205ENST00000423214 HCAR1Q9BXC0 346 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 UNKLQ9H9P5 680 aaKnown RBP13.54□□□□□ -0.24
COL18A1-205ENST00000423214 NDUFAF4Q9P032 175 aa13.54□□□□□ -0.24
COL18A1-205ENST00000423214 IGHV2-70DA0A0C4DH43 119 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 IGHV3-64DA0A0J9YX35 117 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 UNC119BA6NIH7 251 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 IQCF6A8MYZ5 107 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 F5H5P2 479 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 IMPA2O14732 288 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 WNT2P09544 360 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 IRF2P14316 349 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 SELEP16581 610 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 IL13RA1P78552 427 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 MXRA7P84157 204 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 KRT72Q14CN4 511 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 KCNMB1Q16558 191 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 MEP1BQ16820 701 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 TUSC1Q2TAM9 212 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 DPY19L2P2Q6ZN68 376 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 PGAM4Q8N0Y7 254 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 OR52J3Q8NH60 311 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 C7orf34Q96L11 122 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 C1orf147Q96MC9 270 aaPredicted RBP13.53□□□□□ -0.24
COL18A1-205ENST00000423214 ZNF696Q9H7X3 374 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 WDR76Q9H967 626 aa13.53□□□□□ -0.24
COL18A1-205ENST00000423214 SAMD4AQ9UPU9 718 aaKnown RBP13.53□□□□□ -0.24
COL18A1-205ENST00000423214 H0YL77 283 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 MLNRO43193 412 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 DCTN3O75935 186 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 PPP1R3DO95685 299 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 GPANK1O95872 356 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 RENP00797 406 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 PPIAL4GP0DN37 164 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 IGHV4-38-2P0DP08 117 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 RHCEP18577 417 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 FPR3P25089 353 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 CD80P33681 288 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 OMPP47874 163 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 PITPNBP48739 271 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 PAX8Q06710 450 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 ZNF181Q2M3W8 571 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 CORO6Q6QEF8 472 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 SMARCD3Q6STE5 483 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 DEFB107AQ8IZN7 70 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 PYURFQ96I23 114 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 TSSK2Q96PF2 358 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 ERMAPQ96PL5 475 aaPredicted RBP13.52□□□□□ -0.25
COL18A1-205ENST00000423214 CCT8L2Q96SF2 557 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 SLC30A2Q9BRI3 323 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 TMEM246Q9BRR3 403 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 GORASP2Q9H8Y8 452 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 TMEM100Q9NV29 134 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 CD300AQ9UGN4 299 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 LHFPL6Q9Y693 200 aa13.52□□□□□ -0.25
COL18A1-205ENST00000423214 TRBV4-1A0A0J9YWV2 114 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 CLDN34H7C241 214 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 PTP4A3O75365 173 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 TXNDC12O95881 172 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 HSD17B1P14061 328 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 CDKN2AP42771 156 aaKnown RBP13.51□□□□□ -0.25
COL18A1-205ENST00000423214 FXYD6P3P58550 94 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 COX10Q12887 443 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 MALLQ13021 153 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 SEC23BQ15437 767 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 ZNF404Q494X3 552 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 SAMD4BQ5PRF9 694 aaKnown RBP13.51□□□□□ -0.25
COL18A1-205ENST00000423214 LEG1Q6P5S2 330 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 C9orf139Q6ZV77 190 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 SPATC1Q76KD6 591 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 FITM2Q8N6M3 262 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 OR11L1Q8NGX0 322 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 RAB40AQ8WXH6 277 aa13.51□□□□□ -0.25
COL18A1-205ENST00000423214 UPRTQ96BW1 309 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms