RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 RENP00797 406 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 ACSM4P0C7M7 580 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 T-ENOLP0DO92 83 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 ADRA2CP18825 462 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 CENPAP49450 140 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 MMP16P51512 607 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 SEC61A1P61619 476 aaKnown RBP9.29□□□□□ -0.92
SSBP3-206ENST00000420121 MS4A2Q01362 244 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 PPP1R8Q12972 351 aaKnown RBP9.29□□□□□ -0.92
SSBP3-206ENST00000420121 SLC35F1Q5T1Q4 408 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 LYPD4Q6UWN0 246 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 C1QL2Q7Z5L3 287 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 NAA40Q86UY6 237 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 JAZF1Q86VZ6 243 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-206ENST00000420121 OR8G5Q8NG78 346 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 OR10AD1Q8NGE0 317 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 APOBEC3DQ96AK3 386 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-206ENST00000420121 MAP6Q96JE9 813 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 COG8Q96MW5 612 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 OR2V2Q96R30 315 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 SLC30A2Q9BRI3 323 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 C1QTNF5Q9BXJ0 243 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 TRIM15Q9C019 465 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 GCM1Q9NP62 436 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 NDE1Q9NXR1 346 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 IL20Q9NYY1 176 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 UBAP1Q9NZ09 502 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 TMCC3Q9ULS5 477 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 POLR1DQ9Y2S0 133 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 POLR3KQ9Y2Y1 108 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-206ENST00000420121 CDH10Q9Y6N8 788 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 A0A0A6YYJ9 748 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 A0A0G2JMP0 313 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 A0A0X1KG70 313 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 ISPDA4D126 451 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 C5orf63A6NC05 138 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 IQCF6A8MYZ5 107 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 B2RBV5 119 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 TRAPPC2LH3BP13 241 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 TMEM178BH3BS89 294 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 J3QLI3 93 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 KRT36O76013 467 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 GASTP01350 101 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 TNFRSF1AP19438 455 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 EPHA1P21709 976 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 PYCR1P32322 319 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 IFNGR2P38484 337 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 PMELP40967 661 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 RPS27P42677 84 aaKnown RBP9.28□□□□□ -0.92
SSBP3-206ENST00000420121 LCN2P80188 198 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.28□□□□□ -0.92
SSBP3-206ENST00000420121 TMEM155Q4W5P6 130 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 CLEC12AQ5QGZ9 265 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 DCAF12L2Q5VW00 463 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 LCN8Q6JVE9 175 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 LRRC28Q86X40 367 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-206ENST00000420121 CYB561A3Q8NBI2 242 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 DEFB108BQ8NET1 73 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 OR4M2Q8NGB6 313 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 OR52E2Q8NGJ4 325 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 MEGF10Q96KG7 1140 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 CCT8L2Q96SF2 557 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 WDR76Q9H967 626 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 PATZ1Q9HBE1 687 aaKnown RBP9.28□□□□□ -0.92
SSBP3-206ENST00000420121 MMP26Q9NRE1 261 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 PPP1R3CQ9UQK1 317 aa9.28□□□□□ -0.92
SSBP3-206ENST00000420121 PPIAL4EA0A075B759 164 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 PPIAL4CA0A0B4J2A2 164 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 A8MXK9 166 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 PPIAL4DF5H284 164 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 F5H5P2 479 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 TNFRSF11BO00300 401 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 RGS9O75916 674 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-206ENST00000420121 SBK2P0C263 348 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 PPIAL4FP0DN26 164 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 SELEP16581 610 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 TNFSF4P23510 183 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 NOS3P29474 1203 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 OTX1P32242 354 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-206ENST00000420121 SLC6A9P48067 706 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 BTG1P62324 171 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 MXRA7P84157 204 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 TRAP1Q12931 704 aaKnown RBP9.27□□□□□ -0.93
SSBP3-206ENST00000420121 GK2Q14410 553 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-206ENST00000420121 SLC36A3Q495N2 470 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 SHQ1Q6PI26 577 aaKnown RBP9.27□□□□□ -0.93
SSBP3-206ENST00000420121 RASSF6Q6ZTQ3 369 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 USP43Q70EL4 1123 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 LNX2Q8N448 690 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 SLC37A3Q8NCC5 494 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 OR5L1Q8NGL2 311 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 OR13G1Q8NGZ3 307 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 OR4Q3Q8NH05 313 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 ZNF420Q8TAQ5 688 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-206ENST00000420121 DVL3Q92997 716 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-206ENST00000420121 NSL1Q96IY1 281 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 ATF6BQ99941 703 aa9.27□□□□□ -0.93
SSBP3-206ENST00000420121 RBM4Q9BWF3 364 aaKnown RBP9.27□□□□□ -0.93
SSBP3-206ENST00000420121 NMNAT2Q9BZQ4 307 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms