RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 APCDD1LQ8NCL9 501 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 NFAM1Q8NET5 270 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 STEAP2Q8NFT2 490 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 PFN4Q8NHR9 129 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 ZNF417Q8TAU3 575 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 SAT2Q96F10 170 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 TAAR9Q96RI9 348 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 ZPBPQ9BS86 351 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 TUBA4BQ9H853 241 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 UQCC1Q9NVA1 299 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 SEC16AO15027 2179 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 OR2AT4A6NND4 320 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 EIF1AYO14602 144 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 ZNF264O43296 627 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 IGHV2-70P01814 119 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 CYC1P08574 325 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 GTF2F2P13984 249 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 PRF1P14222 555 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 ITPKBP27987 946 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 PRSS3P35030 304 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 DLSTP36957 453 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 EIF1AXP47813 144 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 DIO1P49895 249 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 SLC26A5P58743 744 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 PJVKQ0ZLH3 352 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 PON3Q15166 354 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 CD226Q15762 336 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 FAM74A1Q5RGS3 127 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 TMEM164Q5U3C3 297 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 STEAP1BQ6NZ63 245 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 C6orf15Q6UXA7 325 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 C16orf47Q6ZP98 133 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 SSX6Q7RTT6 188 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 ZNF563Q8TA94 476 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 NIT2Q9NQR4 276 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 FAM86C1Q9NVL1 165 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 ASF1BQ9NVP2 202 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 STEAP1Q9UHE8 339 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 CDV3Q9UKY7 258 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 PADI1Q9ULC6 663 aa13.25□□□□□ -0.29
SEMA4D-204ENST00000420101 RALGAPA1Q6GYQ0 2036 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 COL5A1P20908 1838 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 ASCC3Q8N3C0 2202 aaKnown RBP13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 A0A0B4J2E0 115 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 A0A1B0GX12 115 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 TSPAN2O60636 221 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 NUDT14O95848 222 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 GLAP06280 429 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 PNLIPRP2P54317 469 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 TRIP6Q15654 476 aaKnown RBP13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 AWAT2Q6E213 333 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 FAHD2BQ6P2I3 314 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 ULK3Q6PHR2 472 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 WDR88Q6ZMY6 472 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 MARCH3Q86UD3 253 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 LSRQ86X29 649 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 ZNF441Q8N8Z8 693 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 CLEC1AQ8NC01 280 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 TCTEX1D2Q8WW35 142 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 OIT3Q8WWZ8 545 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 GCDHQ92947 438 aaPredicted RBP13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 SGK3Q96BR1 496 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 FAHD2AQ96GK7 314 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 DEFB126Q9BYW3 111 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 GNG8Q9UK08 70 aa13.24□□□□□ -0.29
SEMA4D-204ENST00000420101 FER1L5A0AVI2 2057 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 A0A0A6YYH2 397 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 PMS2P1A4D2B8 440 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 A6NJ64 397 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 COLCA2A8K830 154 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 F5H0A9 414 aaPredicted RBP13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 HCRTR2O43614 444 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 ZFAND5O76080 213 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 LYPD3O95274 346 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 TCN2P20062 427 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 CASRP41180 1078 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 ARHGDIBP52566 201 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 EIF5AP63241 154 aaKnown RBP13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 EIF2S3LQ2VIR3 472 aaKnown RBP13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 HES3Q5TGS1 186 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 FAAP20Q6NZ36 180 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 KIRREL2Q6UWL6 708 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 OR51S1Q8NGJ8 323 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 NUBPLQ8TB37 319 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 DUSP19Q8WTR2 217 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 LIN37Q96GY3 246 aaPredicted RBP13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 WDR77Q9BQA1 342 aaPredicted RBP13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 ZNF426Q9BUY5 554 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 PARD6AQ9NPB6 346 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 FBXL4Q9UKA2 621 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 CCDC187A0A096LP49 1063 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 TRBV5-5A0A0J9YX44 114 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 METTL21EPA6NDL7 271 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 ZNF729A6NN14 1252 aaPredicted RBP13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 CDC40O60508 579 aaKnown RBP eCLIP13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 MT-ND4LP03901 98 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 CD63P08962 238 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 CD34P28906 385 aa13.23□□□□□ -0.29
SEMA4D-204ENST00000420101 ADH7P40394 386 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms