RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GNPDA2Q8TDQ7 276 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SETD7Q8WTS6 366 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 SKA2Q8WVK7 121 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR5P2Q8WZ92 322 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PHYHIPQ92561 330 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CORO2AQ92828 525 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OSTF1Q92882 214 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 FGF11Q92914 225 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PTP4A1Q93096 173 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 MR1Q95460 341 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 MAL2Q969L2 176 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 NEURL3Q96EH8 262 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SGTBQ96EQ0 304 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 MSANTD3Q96H12 275 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 C2orf48Q96LS8 159 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PRRC1Q96M27 445 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 FOPNLQ96NB1 174 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 IL4I1Q96RQ9 567 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PARK7Q99497 189 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 TMEM175Q9BSA9 504 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 WRAP53Q9BUR4 548 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 MRPL9Q9BYD2 267 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 WWTR1Q9GZV5 400 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 DNTTIP1Q9H147 329 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ABCG5Q9H222 651 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 OR51J1Q9H342 316 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 LRRN3Q9H3W5 708 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 HEXA-AS1Q9H8Q6 139 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 MED20Q9H944 212 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SGK2Q9HBY8 427 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 GPN1Q9HCN4 374 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 IL26Q9NPH9 171 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 B3GAT2Q9NPZ5 323 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 IMP3Q9NV31 184 aaKnown RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 TEX10Q9NXF1 929 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 SLC39A1Q9NY26 324 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 RDH8Q9NYR8 311 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TAS2R16Q9NYV7 291 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 TVP23BQ9NYZ1 205 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 AHSPQ9NZD4 102 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 DNAJC27Q9NZQ0 273 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CALML5Q9NZT1 146 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ABRACLQ9P1F3 81 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 P2RX2Q9UBL9 471 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 EXTL2Q9UBQ6 330 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 LHX3Q9UBR4 397 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CLEC2DQ9UHP7 191 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 FBXL4Q9UKA2 621 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 GMEB2Q9UKD1 530 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PILRBQ9UKJ0 227 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 POMT2Q9UKY4 750 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 SLC22A14Q9Y267 594 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PRELID3BQ9Y3B1 194 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PPIL1Q9Y3C6 166 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 ZNF175Q9Y473 711 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PRSS21Q9Y6M0 314 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 CLCA3PQ9Y6N3 262 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 COLEC10Q9Y6Z7 277 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 PLXNA2O75051 1894 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 NUP210Q8TEM1 1887 aaPredicted RBP2.24□□□□□ -2.05
VPS41-206ENST00000418457 PCM1Q15154 2024 aa2.24□□□□□ -2.05
VPS41-206ENST00000418457 VWA8A3KMH1 1905 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ANAPC1Q9H1A4 1944 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 COL4A6Q14031 1691 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TRAV19A0A0A6YYK7 116 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TRAV1-2A0A0B4J238 106 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 A0A0J9YWU9 116 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 TRAPPC13A5PLN9 417 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MFSD2BA6NFX1 497 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MPTX1A8MV57 137 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 A8MVM7 634 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ARHGEF33A8MVX0 844 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SNRPGP15A8MWD9 76 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 A8MXK9 166 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 E5RGE8 158 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 E7EQ34 232 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 NEDD8-MDP1E9PL57 170 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ATP6V1G2-DDX39BF2Z307 99 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 L7N2F9 121 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 M0R129 80 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 AIPO00170 330 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 WWP2O00308 870 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 NTN3O00634 580 aaPredicted RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 GPR171O14626 319 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 PDCD5O14737 125 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 FFAR1O14842 300 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 PGRMC2O15173 223 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SURF4O15260 269 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 RNF13O43567 381 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SULT1B1O43704 296 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SSNA1O43805 119 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SELENOFO60613 162 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 RP2O75695 350 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 GATBO75879 557 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 AQP8O94778 261 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SOX14O95416 240 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 C6orf47O95873 294 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 IL5P05113 134 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 BCHEP06276 602 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 FHP07954 510 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms