RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 FAM183AA6NL82 134 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 TIPRLO75663 272 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 ATP5HO75947 161 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 OSMP13725 252 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 GPR6P46095 362 aaPredicted RBP17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 CHN2P52757 468 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 LMO4P61968 165 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 USP51Q70EK9 711 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 APOBEC3DQ96AK3 386 aaPredicted RBP17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 ATF6BQ99941 703 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 MED20Q9H944 212 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 CYSLTR2Q9NS75 346 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 KIAA1324LA8MWY0 1029 aaPredicted RBP17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 GNGT2O14610 69 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 CDC14BO60729 498 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 HLA-DQA2P01906 255 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 RAC2P15153 192 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 LIPAP38571 399 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 DAPP51397 102 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 TEX47Q8TBZ9 253 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 NRBF2Q96F24 287 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 COG8Q96MW5 612 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 MMADHCQ9H3L0 296 aaPredicted RBP17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 SAP30LQ9HAJ7 183 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 DCAF16Q9NXF7 216 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 PTTG3PQ9NZH4 202 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 ZDHHC8Q9ULC8 765 aa17.47■□□□□ 0.39
PKNOX1-202ENST00000418336 FAM157AC9JC47 383 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 SURF4O15260 269 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 TIMM8AO60220 97 aaPredicted RBP17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 ANXA8P13928 327 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 CDH15P55291 814 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 ECH1Q13011 328 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 GINS1Q14691 196 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 ATP6AP1Q15904 470 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 SLC27A4Q6P1M0 643 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 PITX2Q99697 317 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 YY1AP1Q9H869 796 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 SLC25A19Q9HC21 320 aa17.46■□□□□ 0.39
PKNOX1-202ENST00000418336 FBN1P35555 2871 aaKnown RBP17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 LOC100289279A0A1B0GTE1 492 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 PLSCR5A0PG75 271 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 RIIAD1A6NNX1 92 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 H3BN98 237 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 MT-ND5P03915 603 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 ZNF823P16415 610 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 SLC2A5P22732 501 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 ENTPD1P49961 510 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 OR2T2Q6IF00 324 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 DCXRQ7Z4W1 244 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 TIGD4Q8IY51 512 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 OR2AJ1Q8NGZ0 328 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 DIRC2Q96SL1 478 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 AMELYQ99218 206 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 CDADC1Q9BWV3 514 aa17.45■□□□□ 0.38
PKNOX1-202ENST00000418336 IQCF6A8MYZ5 107 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 F5H5K5 113 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 LMX1BO60663 402 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 DEAF1O75398 565 aaPredicted RBP17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 E2F6O75461 281 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 IFNGP01579 166 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 ZNF3P17036 446 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 FMO3P31513 532 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 RASSF2P50749 326 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 PRSS12P56730 875 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 GK2Q14410 553 aaPredicted RBP17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 SNAI3Q3KNW1 292 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 TMEM236Q5W0B7 351 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 PARP8Q8N3A8 854 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 OR5K1Q8NHB7 308 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 DECR2Q9NUI1 292 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 WIPI2Q9Y4P8 454 aa17.44■□□□□ 0.38
PKNOX1-202ENST00000418336 H0YL77 283 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 M0R135 149 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 ZNF593O00488 134 aaPredicted RBP17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 MLNRO43193 412 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 PPIHO43447 177 aaKnown RBP17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 GLCEO94923 617 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 POU1F1P28069 291 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 ZMAT1Q5H9K5 638 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 AVPI1Q5T686 147 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 FAM166AQ6J272 317 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 PRSS45Q7RTY3 260 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 BBS1Q8NFJ9 593 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 OR8G5Q8NG78 346 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 SLAMF6Q96DU3 332 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 ELMOD3Q96FG2 381 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 ZNF799Q96GE5 643 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 SIGLEC11Q96RL6 698 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 SLC30A2Q9BRI3 323 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 TREM2Q9NZC2 230 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 MXRA5Q9NR99 2828 aa17.43■□□□□ 0.38
PKNOX1-202ENST00000418336 TGFAP01135 160 aa17.42■□□□□ 0.38
PKNOX1-202ENST00000418336 SPARCP09486 303 aa17.42■□□□□ 0.38
PKNOX1-202ENST00000418336 TNFAIP6P98066 277 aaPredicted RBP17.42■□□□□ 0.38
PKNOX1-202ENST00000418336 EFNB1P98172 346 aa17.42■□□□□ 0.38
PKNOX1-202ENST00000418336 OR5AS1Q8N127 324 aa17.42■□□□□ 0.38
PKNOX1-202ENST00000418336 LINC01356Q8N9X3 169 aa17.42■□□□□ 0.38
PKNOX1-202ENST00000418336 GABARAPL1Q9H0R8 117 aa17.42■□□□□ 0.38
PKNOX1-202ENST00000418336 NARFLQ9H6Q4 476 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms