RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 OR9Q2Q8NGE9 314 aa21.37■■□□□ 1.01
VEGFA-208ENST00000417285 OR52E2Q8NGJ4 325 aa21.37■■□□□ 1.01
VEGFA-208ENST00000417285 OR13G1Q8NGZ3 307 aa21.37■■□□□ 1.01
VEGFA-208ENST00000417285 POP5Q969H6 163 aaKnown RBP21.37■■□□□ 1.01
VEGFA-208ENST00000417285 ZNF582Q96NG8 517 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-208ENST00000417285 CDADC1Q9BWV3 514 aa21.37■■□□□ 1.01
VEGFA-208ENST00000417285 EGLN3Q9H6Z9 239 aa21.37■■□□□ 1.01
VEGFA-208ENST00000417285 TCRBV5S2A0A599 114 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 OR6C68A6NDL8 312 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 CCNB2O95067 398 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 HLA-DQA2P01906 255 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 CPT2P23786 658 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 HILS1P60008 231 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.36■■□□□ 1.01
VEGFA-208ENST00000417285 TRIM25Q14258 630 aaKnown RBP21.36■■□□□ 1.01
VEGFA-208ENST00000417285 CLEC12AQ5QGZ9 265 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 SLC35F1Q5T1Q4 408 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 CORO6Q6QEF8 472 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.36■■□□□ 1.01
VEGFA-208ENST00000417285 ATG16L2Q8NAA4 619 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 OR8G5Q8NG78 346 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 ITLN1Q8WWA0 313 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 BTBD10Q9BSF8 475 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 SUCNR1Q9BXA5 334 aa21.36■■□□□ 1.01
VEGFA-208ENST00000417285 TRIM77I1YAP6 450 aa21.35■■□□□ 1.01
VEGFA-208ENST00000417285 BTG1P62324 171 aa21.35■■□□□ 1.01
VEGFA-208ENST00000417285 HLXQ14774 488 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-208ENST00000417285 FAM98BQ52LJ0 330 aaKnown RBP21.35■■□□□ 1.01
VEGFA-208ENST00000417285 OR4C15Q8NGM1 316 aa21.35■■□□□ 1.01
VEGFA-208ENST00000417285 OR2AJ1Q8NGZ0 328 aa21.35■■□□□ 1.01
VEGFA-208ENST00000417285 OR2V2Q96R30 315 aa21.35■■□□□ 1.01
VEGFA-208ENST00000417285 FN3KQ9H479 309 aa21.35■■□□□ 1.01
VEGFA-208ENST00000417285 PATZ1Q9HBE1 687 aaKnown RBP21.35■■□□□ 1.01
VEGFA-208ENST00000417285 PTTG3PQ9NZH4 202 aa21.35■■□□□ 1.01
VEGFA-208ENST00000417285 PRPF19Q9UMS4 504 aaKnown RBP21.35■■□□□ 1.01
VEGFA-208ENST00000417285 POLR3KQ9Y2Y1 108 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-208ENST00000417285 SELEP16581 610 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 FPR2P25090 351 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 OR2T2Q6IF00 324 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 SLC18B1Q6NT16 456 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 C12orf54Q6X4T0 127 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 COLCA1Q6ZS62 124 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 RASSF6Q6ZTQ3 369 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 ZNF771Q7L3S4 317 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-208ENST00000417285 LINC00346Q8IVM7 164 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 MUC20Q8N307 709 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-208ENST00000417285 FAM216AQ8WUB2 273 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 PITX2Q99697 317 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 GCM1Q9NP62 436 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 DCAF16Q9NXF7 216 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 IL20Q9NYY1 176 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 KCNG2Q9UJ96 466 aa21.34■■□□□ 1.01
VEGFA-208ENST00000417285 BHLHE40O14503 412 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 DYNC1I1O14576 645 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 GASTP01350 101 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 ZFP36P26651 326 aaKnown RBP21.33■■□□□ 1.01
VEGFA-208ENST00000417285 MDH2P40926 338 aaKnown RBP21.33■■□□□ 1.01
VEGFA-208ENST00000417285 SLC6A9P48067 706 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 SRP9P49458 86 aaKnown RBP21.33■■□□□ 1.01
VEGFA-208ENST00000417285 RSPO1Q2MKA7 263 aaPredicted RBP21.33■■□□□ 1.01
VEGFA-208ENST00000417285 ZNF770Q6IQ21 691 aaPredicted RBP21.33■■□□□ 1.01
VEGFA-208ENST00000417285 CFAP77Q6ZQR2 320 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 OR5AS1Q8N127 324 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 AQP11Q8NBQ7 271 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 ATF6BQ99941 703 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 HCAR1Q9BXC0 346 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 C1QTNF5Q9BXJ0 243 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 REEP1Q9H902 201 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 TBC1D23Q9NUY8 699 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 OPN4Q9UHM6 478 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 CYB5R1Q9UHQ9 305 aa21.33■■□□□ 1.01
VEGFA-208ENST00000417285 TMEM178BH3BS89 294 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 ZNF823P16415 610 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 ADRA2CP18825 462 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 ERFP50548 548 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 MS4A2Q01362 244 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 DBPQ10586 325 aaPredicted RBP21.32■■□□□ 1
VEGFA-208ENST00000417285 ZMYND11Q15326 602 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 OR2T5Q6IEZ7 315 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 BPIFB2Q8N4F0 458 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 PROKR2Q8NFJ6 384 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 OR2T4Q8NH00 348 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 OR2T29Q8NH02 315 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 LRGUKQ96M69 825 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 SIGLEC11Q96RL6 698 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 SLC30A2Q9BRI3 323 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 RBM4Q9BWF3 364 aaKnown RBP21.32■■□□□ 1
VEGFA-208ENST00000417285 TMEM100Q9NV29 134 aa21.32■■□□□ 1
VEGFA-208ENST00000417285 SAMHD1Q9Y3Z3 626 aaKnown RBP21.32■■□□□ 1
VEGFA-208ENST00000417285 T-ENOLP0DO92 83 aa21.31■■□□□ 1
VEGFA-208ENST00000417285 GGT2P36268 569 aa21.31■■□□□ 1
VEGFA-208ENST00000417285 MICAQ29983 383 aa21.31■■□□□ 1
VEGFA-208ENST00000417285 KRTAP27-1Q3LI81 207 aa21.31■■□□□ 1
VEGFA-208ENST00000417285 ASB9Q96DX5 294 aa21.31■■□□□ 1
VEGFA-208ENST00000417285 MEGF10Q96KG7 1140 aa21.31■■□□□ 1
VEGFA-208ENST00000417285 PLA2G12AQ9BZM1 189 aa21.31■■□□□ 1
VEGFA-208ENST00000417285 C1orf21Q9H246 121 aa21.31■■□□□ 1
VEGFA-208ENST00000417285 DYSFO75923 2080 aa21.31■■□□□ 1
VEGFA-208ENST00000417285 LRRC30A6NM36 301 aa21.3■■□□□ 1
VEGFA-208ENST00000417285 IQCF6A8MYZ5 107 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms