RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 UEVLDQ8IX04 471 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 SKA3Q8IX90 412 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 SPAG16Q8N0X2 631 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 GHDCQ8N2G8 530 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 ZNF786Q8N393 782 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 STPG2Q8N412 459 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 ZNF561Q8N587 486 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 TMEM251Q8N6I4 163 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 ADPRHL1Q8NDY3 354 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 OR4N2Q8NGD1 307 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 OR8J2Q8NGG1 315 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 MOSPD2Q8NHP6 518 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 SPPL2AQ8TCT8 520 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 DYNC2LI1Q8TCX1 351 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 SFXN5Q8TD22 340 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 MAFIPQ8WZ33 124 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 HGDQ93099 445 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 FAM120BQ96EK7 910 aaKnown RBP4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 MARK4Q96L34 752 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 TEX37Q96LM6 180 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 COL21A1Q96P44 957 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 MS4A4EQ96PG1 132 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 OR52B2Q96RD2 323 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 NODALQ96S42 347 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 PFDN5Q99471 154 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 ZNF559Q9BR84 538 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 LMF2Q9BU23 707 aaKnown RBP4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 DOHHQ9BU89 302 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 TTTY12Q9BZ98 90 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 DPY30Q9C005 99 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 NMUR2Q9GZQ4 415 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 NXF2Q9GZY0 626 aaKnown RBP4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 SEMA6AQ9H2E6 1030 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 OR51B6Q9H340 312 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 GAL3ST2Q9H3Q3 398 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 RIMS4Q9H426 269 aaPredicted RBP4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 METTL7AQ9H8H3 244 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 ZDHHC11Q9H8X9 412 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 IL1RL2Q9HB29 575 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 Q9N2J8 555 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 NANSQ9NR45 359 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 SIRT3Q9NTG7 399 aaPredicted RBP4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 AIG1Q9NVV5 245 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 SEC14L3Q9UDX4 400 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 UBQLN2Q9UHD9 624 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 SCP2D1Q9UJQ7 156 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 BOKQ9UMX3 212 aaPredicted RBP4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 OR10H1Q9Y4A9 318 aa4.31□□□□□ -1.72
ATG4AP1-201ENST00000416893 ABCA2Q9BZC7 2435 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 TRGV8A0A0C4DH27 118 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 A0A1B0GW55 424 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 KDM4EB2RXH2 506 aaPredicted RBP4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 UBE2CO00762 179 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 UBDO15205 165 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 CFLARO15519 480 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 ZNHIT1O43257 154 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 CDC40O60508 579 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 SLC19A2O60779 497 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 SMPD2O60906 423 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 SCN2BO60939 215 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 ICOSLGO75144 302 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 EIF3GO75821 320 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 NKX2-2O95096 273 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 LDLRP01130 860 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 IGKV1D-16P01601 117 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 IGHG3P01860 377 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 RAF1P04049 648 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 HCKP08631 526 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 DUX4L2P0CJ85 424 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 DUX4L3P0CJ86 424 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 DUX4L4P0CJ87 422 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 DUX4L5P0CJ88 424 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 DUX4L6P0CJ89 424 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 DUX4L7P0CJ90 424 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 ADORA3P0DMS8 318 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 ACP2P11117 423 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 IFI30P13284 250 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 CYP4B1P13584 511 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 FOLR2P14207 255 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 PAICSP22234 425 aaKnown RBP4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 IL12BP29460 328 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 GABRA3P34903 492 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 SOAT1P35610 550 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 PTGDSP41222 190 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 MAP3K8P41279 467 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 MAGEA5P43359 124 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 CDH15P55291 814 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 UFM1P61960 85 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 HBA1P69905 142 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 HTD2P86397 168 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 HSF2Q03933 536 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 RBPJQ06330 500 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 MERTKQ12866 999 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 MAB21L1Q13394 359 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 LASP1Q14847 261 aaKnown RBP4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 C3AR1Q16581 482 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 CTF1Q16619 201 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 GUCA2BQ16661 112 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 DUSP5Q16690 384 aa4.3□□□□□ -1.72
ATG4AP1-201ENST00000416893 DECR1Q16698 335 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms