RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CRYBB2P43320 205 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 OR3A4PP47883 348 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 TMED10P49755 219 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 SEMG2Q02383 582 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CALCOCO2Q13137 446 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 FADDQ13158 208 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 C5orf64Q2M2E5 130 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 KIAA1644Q3SXP7 199 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 TFDP3Q5H9I0 405 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CROCCQ5TZA2 2017 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ERICH5Q6P6B1 374 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 FAM183BPQ6ZVS7 135 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 HDDC2Q7Z4H3 204 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 BPIFB2Q8N4F0 458 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 SLC16A11Q8NCK7 471 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ZNF680Q8NEM1 530 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 OR5T3Q8NGG3 340 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 JOSD2Q8TAC2 188 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 C8orf46Q8TAG6 207 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 C1orf54Q8WWF1 131 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 MRPS31Q92665 395 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 ZNF597Q96LX8 424 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 TBX15Q96SF7 602 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 SH3GL1Q99961 368 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CNPY3Q9BT09 278 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 FAIM2Q9BWQ8 316 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 C6orf106Q9H6K1 298 aaPredicted RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 Q9HAA7 133 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 ZC4H2Q9NQZ6 224 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CUTCQ9NTM9 273 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 C20orf96Q9NUD7 363 aaPredicted RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 MTRF1LQ9UGC7 380 aaKnown RBP2.1□□□□□ -2.07
MCF2-204ENST00000414978 ASIC3Q9UHC3 531 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 PCYOX1Q9UHG3 505 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CFL2Q9Y281 166 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 CPQQ9Y646 472 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 DOPEY2Q9Y3R5 2298 aa2.1□□□□□ -2.07
MCF2-204ENST00000414978 MED13Q9UHV7 2174 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 ZFC3H1O60293 1989 aaKnown RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 CNOT1A5YKK6 2376 aaKnown RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 MED13LQ71F56 2210 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 IGHV4-4A0A075B6R2 117 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 GOLGA8QA0A0J9YX86 632 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 A0A1B0GTH9 108 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 A0A1W2PNU3 283 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 PRR23D1E9PI22 279 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 HCRTO43612 131 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 PCDH7O60245 1069 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 FCN3O75636 299 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 CISD3P0C7P0 127 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 PRR23D2P0DMB1 279 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 RFX3P48380 749 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 DAP3P51398 398 aaKnown RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 CCR8P51685 355 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 YWHAGP61981 247 aaKnown RBP eCLIP2.09□□□□□ -2.07
MCF2-204ENST00000414978 PUDPQ08623 228 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 ARL16Q0P5N6 197 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 MUC21Q5SSG8 566 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 GPR157Q5UAW9 335 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 TIGD3Q6B0B8 471 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 ANKRD26P1Q6NSI1 321 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 FAM199XQ6PEV8 388 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 RANBP3LQ86VV4 465 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 SLC26A11Q86WA9 606 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 C17orf64Q86WR6 236 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 ENTHD1Q8IYW4 607 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 PROKR2Q8NFJ6 384 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 MAGEE2Q8TD90 523 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 RXFP2Q8WXD0 754 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 ACOT11Q8WXI4 607 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 UFD1Q92890 307 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 SLC38A4Q969I6 547 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 HSFY1Q96LI6 401 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 CALN1Q9BXU9 219 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 CHIAQ9BZP6 476 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 NMUR1Q9HB89 426 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 FGF20Q9NP95 211 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 MED4Q9NPJ6 270 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 WARS2Q9UGM6 360 aaKnown RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 MYOFQ9NZM1 2061 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 FLNBO75369 2602 aaKnown RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 TRBV5-4A0A0C4DH59 114 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 GOLGA6L10A6NI86 522 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 CCSO14618 274 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 TM9SF1O15321 606 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 ZNF189O75820 626 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 BCKDHAP12694 445 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 PGCP20142 388 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 MIPP30301 263 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 PCK1P35558 622 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 HILS1P60008 231 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 RPL10AP62906 217 aaKnown RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 DYNLT1P63172 113 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 ADIGQ0VDE8 80 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 ECH1Q13011 328 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 SIX1Q15475 284 aaPredicted RBP2.09□□□□□ -2.07
MCF2-204ENST00000414978 ZIC1Q15915 447 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 DUPD1Q68J44 220 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 SLC35D2Q76EJ3 337 aa2.09□□□□□ -2.07
MCF2-204ENST00000414978 ZNF771Q7L3S4 317 aaPredicted RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms