RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 OR1F12Q8NHA8 337 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 KTI12Q96EK9 354 aaPredicted RBP10.78□□□□□ -0.68
PTPRF-205ENST00000414879 TMEM68Q96MH6 324 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 ZNF681Q96N22 645 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 PPIL3Q9H2H8 161 aaKnown RBP10.78□□□□□ -0.68
PTPRF-205ENST00000414879 TAS2R4Q9NYW5 299 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 ICAM5Q9UMF0 924 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 EXO1Q9UQ84 846 aaKnown RBP10.78□□□□□ -0.68
PTPRF-205ENST00000414879 A8MV72 311 aaPredicted RBP10.78□□□□□ -0.68
PTPRF-205ENST00000414879 TERTO14746 1132 aaKnown RBP10.78□□□□□ -0.68
PTPRF-205ENST00000414879 ATP6V1G1O75348 118 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 SLC2A10O95528 541 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 PRSS41Q7RTY9 318 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 PIGTQ969N2 578 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 REEP6Q96HR9 211 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 OR5H15A6NDH6 313 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 ZNF732B4DXR9 585 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 GPX5O75715 221 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 TPPPO94811 219 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 TSPAN15O95858 294 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 ZNF883P0CG24 379 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 SLC37A1P57057 533 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 CD276Q5ZPR3 534 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 MTFR2Q6P444 385 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 OR2W3Q7Z3T1 314 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 CRIPAKQ8N1N5 446 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 PLPP7Q8NBV4 271 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 NPEPL1Q8NDH3 523 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 TAAR8Q969N4 342 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 KNL1Q8NG31 2342 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 MYO16Q9Y6X6 1858 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 ARPC5O15511 151 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 APEX1P27695 318 aaKnown RBP10.78□□□□□ -0.68
PTPRF-205ENST00000414879 OR8B8Q15620 311 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 BCL2A1Q16548 175 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 VHLLQ6RSH7 139 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 DYNC2LI1Q8TCX1 351 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 GIMAP1Q8WWP7 306 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 HSD17B8Q92506 261 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 UQCC2Q9BRT2 126 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 LANCL2Q9NS86 450 aa10.78□□□□□ -0.68
PTPRF-205ENST00000414879 MYF5P13349 255 aa10.77□□□□□ -0.68
PTPRF-205ENST00000414879 CAV3P56539 151 aa10.77□□□□□ -0.68
PTPRF-205ENST00000414879 CLDN12P56749 244 aa10.77□□□□□ -0.68
PTPRF-205ENST00000414879 CEACAM16Q2WEN9 425 aa10.77□□□□□ -0.68
PTPRF-205ENST00000414879 GFRALQ6UXV0 394 aa10.77□□□□□ -0.68
PTPRF-205ENST00000414879 OR51F2Q8NH61 342 aa10.77□□□□□ -0.68
PTPRF-205ENST00000414879 SEH1LQ96EE3 360 aa10.77□□□□□ -0.68
PTPRF-205ENST00000414879 CHST6Q9GZX3 395 aa10.77□□□□□ -0.68
PTPRF-205ENST00000414879 CRLF2Q9HC73 371 aa10.77□□□□□ -0.68
PTPRF-205ENST00000414879 URB1O60287 2271 aaKnown RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 AQP8O94778 261 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 RGS19P49795 217 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 IDH3GP51553 393 aaPredicted RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 RRAS2P62070 204 aaPredicted RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 CISD2Q8N5K1 135 aaKnown RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 RASL10BQ96S79 203 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 CEBPZOSA8MTT3 80 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 SERPINE3A8MV23 424 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 IGFBP1P08833 259 aaPredicted RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 FGF5P12034 268 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 YBX1P67809 324 aaKnown RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 PSG6Q00889 435 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 ZNF616Q08AN1 781 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 NRARPQ7Z6K4 114 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 SIAH3Q8IW03 269 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 FAM185AQ8N0U4 392 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 SLC38A9Q8NBW4 561 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 APOBEC4Q8WW27 367 aaKnown RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 C10orf35Q96D05 121 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 ZC3H10Q96K80 434 aaKnown RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 EIF5A2Q9GZV4 153 aaKnown RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 CES1P1Q9UKY3 287 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 C5orf49A4QMS7 147 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 C17orf112F2Z3M2 114 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 HOXD4P09016 255 aaPredicted RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 UQCRC1P31930 480 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 RPS18P62269 152 aaKnown RBP10.77□□□□□ -0.69
PTPRF-205ENST00000414879 STEAP3Q658P3 488 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 STAC2Q6ZMT1 411 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 CD300LFQ8TDQ1 290 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 TGIF2Q9GZN2 237 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 PILRAQ9UKJ1 303 aa10.77□□□□□ -0.69
PTPRF-205ENST00000414879 SLC17A2O00624 439 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 BET1O15155 118 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 PLPP2O43688 288 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 ATF1P18846 271 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 LSM6P62312 80 aaKnown RBP10.76□□□□□ -0.69
PTPRF-205ENST00000414879 SOWAHCQ53LP3 525 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-205ENST00000414879 ZNF501Q96CX3 271 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-205ENST00000414879 ZNF486Q96H40 463 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-205ENST00000414879 LAMP3Q9UQV4 416 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 MEIS3P1A6NDR6 274 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 PLPP3O14495 311 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 MSTNO14793 375 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 TNFRSF1AP19438 455 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 EVX1P49640 407 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 GSG1Q2KHT4 349 aa10.76□□□□□ -0.69
PTPRF-205ENST00000414879 WIPI1Q5MNZ9 446 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-205ENST00000414879 FBXW12Q6X9E4 464 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms