RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TAF13Q15543 124 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 CFAP77Q6ZQR2 320 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 PRIMA1Q86XR5 153 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 ATG16L2Q8NAA4 619 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 OR2Z1Q8NG97 314 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 OR6K6Q8NGW6 343 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 OR4Q3Q8NH05 313 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 CLDND2Q8NHS1 167 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 SPTSSAQ969W0 71 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 ZNF582Q96NG8 517 aaPredicted RBP9.53□□□□□ -0.88
RFFL-204ENST00000414419 DDOQ99489 341 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 RBM4Q9BWF3 364 aaKnown RBP9.53□□□□□ -0.88
RFFL-204ENST00000414419 HCAR1Q9BXC0 346 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 TEX12Q9BXU0 123 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 CADM1Q9BY67 442 aaKnown RBP9.53□□□□□ -0.88
RFFL-204ENST00000414419 POFUT1Q9H488 388 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 CMC2Q9NRP2 79 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 MRPL22Q9NWU5 206 aaKnown RBP9.53□□□□□ -0.88
RFFL-204ENST00000414419 TREM2Q9NZC2 230 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 DNAJB9Q9UBS3 223 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 WNK2Q9Y3S1 2297 aa9.53□□□□□ -0.88
RFFL-204ENST00000414419 TCRBV3S1A0A5B6 114 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 B4DSR2 109 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 ZNF593O00488 134 aaPredicted RBP9.52□□□□□ -0.89
RFFL-204ENST00000414419 GYPBP06028 91 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 CD55P08174 381 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 SPARCP09486 303 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 ANPEPP15144 967 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 SPI1P17947 270 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 PCMT1P22061 227 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 IGFBP5P24593 272 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 GRK5P34947 590 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 SLC6A9P48067 706 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 ENTPD1P49961 510 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 SLC25A1P53007 311 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 MALLQ13021 153 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 CDK5R2Q13319 367 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 HLXQ14774 488 aaPredicted RBP9.52□□□□□ -0.89
RFFL-204ENST00000414419 TMEM255AQ5JRV8 349 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 ZNF362Q5T0B9 420 aaPredicted RBP9.52□□□□□ -0.89
RFFL-204ENST00000414419 AVPI1Q5T686 147 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 SLC27A4Q6P1M0 643 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 FBXW12Q6X9E4 464 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 TMEM179BQ7Z7N9 219 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 OR5AS1Q8N127 324 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 PLEKHA8Q96JA3 519 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 SOX7Q9BT81 388 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 MMADHCQ9H3L0 296 aaPredicted RBP9.52□□□□□ -0.89
RFFL-204ENST00000414419 KIF17Q9P2E2 1029 aa9.52□□□□□ -0.89
RFFL-204ENST00000414419 ISPDA4D126 451 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 M0R135 149 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 DEAF1O75398 565 aaPredicted RBP9.51□□□□□ -0.89
RFFL-204ENST00000414419 HMGN1P05114 100 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 ACSM4P0C7M7 580 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 FAM157CP0CG43 387 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 OSMP13725 252 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 SELEP16581 610 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 SRD5A1P18405 259 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 PRKACGP22612 351 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 RPS27P42677 84 aaKnown RBP9.51□□□□□ -0.89
RFFL-204ENST00000414419 GINS1Q14691 196 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 FAM120AOSQ5T036 256 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 OR2T2Q6IF00 324 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 DCXRQ7Z4W1 244 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 GLCCI1Q86VQ1 547 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 IQCF1Q8N6M8 205 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 ZNF511Q8NB15 262 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 PAPD5Q8NDF8 572 aaKnown RBP9.51□□□□□ -0.89
RFFL-204ENST00000414419 OR8G5Q8NG78 346 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 OR13G1Q8NGZ3 307 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 ZNRF4Q8WWF5 429 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 RAB39BQ96DA2 213 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 ZNF799Q96GE5 643 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 MAP6Q96JE9 813 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 COPS4Q9BT78 406 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 C1QTNF5Q9BXJ0 243 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 NMNAT2Q9BZQ4 307 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 WDR76Q9H967 626 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 CENPMQ9NSP4 180 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 IL19Q9UHD0 177 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 TMEFF2Q9UIK5 374 aaPredicted RBP9.51□□□□□ -0.89
RFFL-204ENST00000414419 WIPI2Q9Y4P8 454 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 CACNG2Q9Y698 323 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 COMMD3-BMI1R4GMX3 469 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 DOCK11Q5JSL3 2073 aa9.51□□□□□ -0.89
RFFL-204ENST00000414419 FAM183AA6NL82 134 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 KIAA1324LA8MWY0 1029 aaPredicted RBP9.5□□□□□ -0.89
RFFL-204ENST00000414419 PRR23D1E9PI22 279 aaPredicted RBP9.5□□□□□ -0.89
RFFL-204ENST00000414419 WNT9BO14905 357 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 TIPRLO75663 272 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 PRR23D2P0DMB1 279 aaPredicted RBP9.5□□□□□ -0.89
RFFL-204ENST00000414419 CLUP10909 449 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 SLC15A1P46059 708 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 DVL1P1P54792 670 aaPredicted RBP9.5□□□□□ -0.89
RFFL-204ENST00000414419 RSPO1Q2MKA7 263 aaPredicted RBP9.5□□□□□ -0.89
RFFL-204ENST00000414419 CR1LQ2VPA4 569 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 C1orf146Q5VVC0 180 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 SHQ1Q6PI26 577 aaKnown RBP9.5□□□□□ -0.89
RFFL-204ENST00000414419 LYPD4Q6UWN0 246 aa9.5□□□□□ -0.89
RFFL-204ENST00000414419 DRAM2Q6UX65 266 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms