RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 HIPK1Q86Z02 1210 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 OR5L1Q8NGL2 311 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 OR10S1Q8NGN2 331 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 APOBEC3DQ96AK3 386 aaPredicted RBP12.59□□□□□ -0.39
LIMS4-201ENST00000413601 HCAR1Q9BXC0 346 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 MED20Q9H944 212 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 NTN4Q9HB63 628 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 CMC2Q9NRP2 79 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 TREM2Q9NZC2 230 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 CGGBP1Q9UFW8 167 aaPredicted RBP12.59□□□□□ -0.39
LIMS4-201ENST00000413601 ZDHHC8Q9ULC8 765 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 CACNG2Q9Y698 323 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 COMMD3-BMI1R4GMX3 469 aa12.59□□□□□ -0.39
LIMS4-201ENST00000413601 J3QW42 95 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 LMX1BO60663 402 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 TGFAP01135 160 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 ADH4P08319 380 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 SPARCP09486 303 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 ACSM4P0C7M7 580 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 OSMP13725 252 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 ANXA8P13928 327 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 RAC2P15153 192 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 CDK5R2Q13319 367 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 GINS1Q14691 196 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 ZMAT1Q5H9K5 638 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 SLC27A4Q6P1M0 643 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 Q6ZR03 302 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 COLCA1Q6ZS62 124 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 OR5AS1Q8N127 324 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 OR6K6Q8NGW6 343 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 CLDND2Q8NHS1 167 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 HPS1Q92902 700 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 OTULINQ96BN8 352 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 EGLN1Q9GZT9 426 aa12.58□□□□□ -0.4
LIMS4-201ENST00000413601 MMADHCQ9H3L0 296 aaPredicted RBP12.58□□□□□ -0.4
LIMS4-201ENST00000413601 ZNF593O00488 134 aaPredicted RBP12.57□□□□□ -0.4
LIMS4-201ENST00000413601 DEAF1O75398 565 aaPredicted RBP12.57□□□□□ -0.4
LIMS4-201ENST00000413601 ENTPD1P49961 510 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 TNFAIP6P98066 277 aaPredicted RBP12.57□□□□□ -0.4
LIMS4-201ENST00000413601 MVKQ03426 396 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 HNRNPA0Q13151 305 aaKnown RBP12.57□□□□□ -0.4
LIMS4-201ENST00000413601 HFEQ30201 348 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 AVPI1Q5T686 147 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 C1orf146Q5VVC0 180 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 OR2T2Q6IF00 324 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 SHQ1Q6PI26 577 aaKnown RBP12.57□□□□□ -0.4
LIMS4-201ENST00000413601 FBXW12Q6X9E4 464 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 DCXRQ7Z4W1 244 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 ATG16L2Q8NAA4 619 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 OR2Z1Q8NG97 314 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 CCL17Q92583 94 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 UTP4Q969X6 686 aaKnown RBP12.57□□□□□ -0.4
LIMS4-201ENST00000413601 ELMOD3Q96FG2 381 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 DIRC2Q96SL1 478 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 C1QTNF5Q9BXJ0 243 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 KCNS2Q9ULS6 477 aa12.57□□□□□ -0.4
LIMS4-201ENST00000413601 M0R135 149 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 LCATP04180 440 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 CD55P08174 381 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 IGFBP5P24593 272 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 RBMXP38159 391 aaKnown RBP12.56□□□□□ -0.4
LIMS4-201ENST00000413601 TPTEP56180 551 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 PRSS12P56730 875 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 CDK5Q00535 292 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 PCK2Q16822 640 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 CHRFAM7AQ494W8 412 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 LINC01590Q5TEZ4 76 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 TMEM236Q5W0B7 351 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 LINC01356Q8N9X3 169 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 NRBF2Q96F24 287 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 ZNF799Q96GE5 643 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 TMEM160Q9NX00 188 aa12.56□□□□□ -0.4
LIMS4-201ENST00000413601 KIAA1324LA8MWY0 1029 aaPredicted RBP12.55□□□□□ -0.4
LIMS4-201ENST00000413601 CLDN25C9JDP6 229 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 PRR23D1E9PI22 279 aaPredicted RBP12.55□□□□□ -0.4
LIMS4-201ENST00000413601 SURF4O15260 269 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 PRR23D2P0DMB1 279 aaPredicted RBP12.55□□□□□ -0.4
LIMS4-201ENST00000413601 PAICSP22234 425 aaKnown RBP12.55□□□□□ -0.4
LIMS4-201ENST00000413601 TNFSF4P23510 183 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 SLC6A9P48067 706 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 DAPP51397 102 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 BLVRAP53004 296 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 CDH15P55291 814 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 GK2Q14410 553 aaPredicted RBP12.55□□□□□ -0.4
LIMS4-201ENST00000413601 ATP6AP1Q15904 470 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 TEX30Q5JUR7 227 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 PLBD1Q6P4A8 553 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 ERI1Q8IV48 349 aaKnown RBP12.55□□□□□ -0.4
LIMS4-201ENST00000413601 BHLHE23Q8NDY6 225 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 OR8G5Q8NG78 346 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 OR5K1Q8NHB7 308 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 ST7LQ8TDW4 575 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 SPTSSAQ969W0 71 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 SLAMF6Q96DU3 332 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 C1orf159Q96HA4 380 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 BEX2Q9BXY8 128 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 OR51V1Q9H2C8 321 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 PAPOLBQ9NRJ5 636 aaKnown RBP12.55□□□□□ -0.4
LIMS4-201ENST00000413601 CENPMQ9NSP4 180 aa12.55□□□□□ -0.4
LIMS4-201ENST00000413601 DDX28Q9NUL7 540 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms