RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 ZNF555Q8NEP9 628 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 SYNPRQ8TBG9 265 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 RNF133Q8WVZ7 376 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 TRUB1Q8WWH5 349 aaKnown RBP11.96□□□□□ -0.49
CPNE1-206ENST00000412056 CYGBQ8WWM9 190 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 IPCEF1Q8WWN9 437 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-206ENST00000412056 TRMT61AQ96FX7 289 aaKnown RBP11.96□□□□□ -0.49
CPNE1-206ENST00000412056 ZNF799Q96GE5 643 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 KCNJ15Q99712 375 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 CXXC4Q9H2H0 198 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 DYNLRB1Q9NP97 96 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 HAO2Q9NYQ3 351 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 PTTG3PQ9NZH4 202 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 LAMP5Q9UJQ1 280 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 PMF1-BGLAPU3KQ54 211 aa11.96□□□□□ -0.49
CPNE1-206ENST00000412056 A0A1W2PPW3 197 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 PRR32B1ATL7 298 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 ENTPD6O75354 484 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 CLIC3O95833 236 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 IGHV4-39P01824 125 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 GCH1P30793 250 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 OPRL1P41146 370 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 ALDH3B1P43353 468 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 SLC6A9P48067 706 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 EVX1P49640 407 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 PPOXP50336 477 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 NUDT6P53370 316 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 GRB2P62993 217 aaKnown RBP11.95□□□□□ -0.5
CPNE1-206ENST00000412056 TESK1Q15569 626 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 OCLNQ16625 522 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 MBNL2Q5VZF2 373 aaKnown RBP11.95□□□□□ -0.5
CPNE1-206ENST00000412056 COLCA1Q6ZS62 124 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 DHRSXQ8N5I4 330 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 ZNF283Q8N7M2 679 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 OR51G2Q8NGK0 314 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 KLF14Q8TD94 323 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-206ENST00000412056 GTF3AQ92664 365 aaKnown RBP11.95□□□□□ -0.5
CPNE1-206ENST00000412056 SPTSSAQ969W0 71 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 APOBEC3DQ96AK3 386 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-206ENST00000412056 SORCS2Q96PQ0 1159 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 VRK1Q99986 396 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-206ENST00000412056 C1QTNF5Q9BXJ0 243 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 TAAR3PQ9P1P4 343 aa11.95□□□□□ -0.5
CPNE1-206ENST00000412056 CREBBPQ92793 2442 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 C5orf63A6NC05 138 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 H3BSA7 217 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 J3QW42 95 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 M0R233 179 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 PSMD9O00233 223 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 LCATP04180 440 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 ADRA2AP08913 450 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 H2BFMP0C1H6 154 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 SBK2P0C263 348 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 SLC2A1P11166 492 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 BMP4P12644 408 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 HSD11B1P28845 292 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 SLC15A1P46059 708 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 CX3CR1P49238 355 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 ADARB1P78563 741 aaKnown RBP11.94□□□□□ -0.5
CPNE1-206ENST00000412056 SNAI3Q3KNW1 292 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 Q5PR19 223 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 SLC25A30Q5SVS4 291 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 DRAM2Q6UX65 266 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 LRRN1Q6UXK5 716 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 C1orf174Q8IYL3 243 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 ZCCHC24Q8N2G6 241 aaKnown RBP11.94□□□□□ -0.5
CPNE1-206ENST00000412056 RHOXF1Q8NHV9 184 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 ADI1Q9BV57 179 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 VCXQ9H320 206 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 TPK1Q9H3S4 243 aa11.94□□□□□ -0.5
CPNE1-206ENST00000412056 TANC2Q9HCD6 1990 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 ZNF670-ZNF695F2Z2N8 137 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 MPZL2O60487 215 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 LY6HO94772 140 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 ATP6V1G2O95670 118 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 IGHV3-13P01766 116 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 PRSS12P56730 875 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 SELENOVP59797 346 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 CXCR4P61073 352 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 POU4F2Q12837 409 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 PSG7Q13046 419 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 TMED1Q13445 227 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 HLXQ14774 488 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-206ENST00000412056 NKPD1Q17RQ9 610 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 ZNF691Q5VV52 312 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 MEDAGQ5VYS4 303 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 TTC23Q5W5X9 447 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 SSX6Q7RTT6 188 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 KRT77Q7Z794 578 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 OR5L1Q8NGL2 311 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 APH1BQ8WW43 257 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 RFKQ969G6 155 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 CMBLQ96DG6 245 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 COG8Q96MW5 612 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 OR8B4Q96RC9 309 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 TBX5Q99593 518 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 APOL4Q9BPW4 351 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 CLN6Q9NWW5 311 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 SLCO1C1Q9NYB5 712 aa11.93□□□□□ -0.5
CPNE1-206ENST00000412056 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms