RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 NUP50Q9UKX7 468 aa13.81□□□□□ -0.2
SCAMP4-203ENST00000411971 B9D1Q9UPM9 204 aa13.81□□□□□ -0.2
SCAMP4-203ENST00000411971 MDFIC2A0A1B0GVS7 189 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 A0A1B0GWJ7 208 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 HIST1H1CP16403 213 aaKnown RBP13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 TUBG1P23258 451 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 TNFSF4P23510 183 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 MDH2P40926 338 aaKnown RBP13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 COX10Q12887 443 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 MAB21L1Q13394 359 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 ARMCX4Q5H9R4 360 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 SLC18B1Q6NT16 456 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 LEG1Q6P5S2 330 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 ADCK1Q86TW2 530 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 MOGAT3Q86VF5 341 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 CYP4Z1Q86W10 505 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 TEX29Q8N6K0 151 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 OR10S1Q8NGN2 331 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 ERMAPQ96PL5 475 aaPredicted RBP13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 TMEM246Q9BRR3 403 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 OR52D1Q9H346 318 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 TUBG2Q9NRH3 451 aa13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 MRPL22Q9NWU5 206 aaKnown RBP13.8□□□□□ -0.2
SCAMP4-203ENST00000411971 OR6C68A6NDL8 312 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 IQCF6A8MYZ5 107 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 KCNAB3O43448 404 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 CCDC22O60826 627 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 ACSM4P0C7M7 580 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 HKR1P10072 659 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 RPS27P42677 84 aaKnown RBP13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 CENPAP49450 140 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 SMARCD3Q6STE5 483 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 LYPD4Q6UWN0 246 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 OR4K13Q8NH42 304 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 APOBEC3DQ96AK3 386 aaPredicted RBP13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 COQ7Q99807 217 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 ATPIF1Q9UII2 106 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 AURKCQ9UQB9 309 aa13.79□□□□□ -0.2
SCAMP4-203ENST00000411971 TMPRSS2O15393 492 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 PRTN3P24158 256 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 FPR2P25090 351 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 GGT2P36268 569 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 MPPED2Q15777 294 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 RFX4Q33E94 735 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 ESCO2Q56NI9 601 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 KLBQ86Z14 1044 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 FANK1Q8TC84 345 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 MAP6Q96JE9 813 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 DDOQ99489 341 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 ELAC2Q9BQ52 826 aaKnown RBP13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 HDHD2Q9H0R4 259 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 RPRD1BQ9NQG5 326 aaKnown RBP13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 DDX28Q9NUL7 540 aaKnown RBP13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 POLR1DQ9Y2S0 133 aa13.78□□□□□ -0.2
SCAMP4-203ENST00000411971 J3QW42 95 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 ARPC3O15145 178 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 SURF4O15260 269 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 FCN3O75636 299 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 RGS6P49758 472 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 RPS6KA3P51812 740 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 GK2Q14410 553 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 ZNF404Q494X3 552 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 CLEC12AQ5QGZ9 265 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 PRAMEF6Q5VXH4 476 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 ZNF841Q6ZN19 808 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 ZBTB46Q86UZ6 589 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 SDR9C7Q8NEX9 313 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 GJC3Q8NFK1 279 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 OR13G1Q8NGZ3 307 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 COG8Q96MW5 612 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 ZNF582Q96NG8 517 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 ZNF747Q9BV97 191 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 CDADC1Q9BWV3 514 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 SSBP3Q9BWW4 388 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 NTN4Q9HB63 628 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 ADA2Q9NZK5 511 aa13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 FAM32AQ9Y421 112 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-203ENST00000411971 IGHV2-70DA0A0C4DH43 119 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 F5H5K5 113 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 GADD45GO95257 159 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 PLATP00750 562 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 RPS2P15880 293 aaKnown RBP13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 FPR3P25089 353 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 CRABP1P29762 137 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 GSSP48637 474 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 RAD23AP54725 363 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 SPIBQ01892 262 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 SLC9A3R2Q15599 337 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 SNAI3Q3KNW1 292 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 ZNF362Q5T0B9 420 aaPredicted RBP13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 SLC35F1Q5T1Q4 408 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 PARP8Q8N3A8 854 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 UPRTQ96BW1 309 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 PYURFQ96I23 114 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 EGLN3Q9H6Z9 239 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 GORASP2Q9H8Y8 452 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 SPAG4Q9NPE6 437 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 CTSZQ9UBR2 303 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 CD300AQ9UGN4 299 aa13.76□□□□□ -0.21
SCAMP4-203ENST00000411971 CYB5R1Q9UHQ9 305 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms