RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 CLPSL1A2RUU4 121 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 BBIP1A8MTZ0 92 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 IQCF6A8MYZ5 107 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 FAM220BPB1ANY3 271 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 J3KTA2 159 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 CDC42EP2O14613 210 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 TIMM23O14925 209 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 MLNRO43193 412 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 ATP8B1O43520 1251 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 ENSAO43768 121 aaKnown RBP13.92□□□□□ -0.18
MRPL55-220ENST00000411464 NDUFA7O95182 113 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 SELEP16581 610 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 FPR3P25089 353 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 PMELP40967 661 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 GPR4P46093 362 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 CENPAP49450 140 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 PDCD1Q15116 288 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 LYPD2Q6UXB3 125 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 FAM122BQ7Z309 247 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 TMEM86BQ8N661 226 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 GJC3Q8NFK1 279 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 OR11L1Q8NGX0 322 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 CITED1Q99966 193 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 CDADC1Q9BWV3 514 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 CHIAQ9BZP6 476 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 MMP27Q9H306 513 aa13.92□□□□□ -0.18
MRPL55-220ENST00000411464 ELOVL7A1L3X0 281 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 FFAR1O14842 300 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 EDF1O60869 148 aaKnown RBP13.91□□□□□ -0.18
MRPL55-220ENST00000411464 HLA-DPB1P04440 258 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 ZNF26P17031 533 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-220ENST00000411464 SDHAP31040 664 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 GATA4P43694 442 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 RELBQ01201 579 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 KRR1Q13601 381 aaKnown RBP13.91□□□□□ -0.18
MRPL55-220ENST00000411464 CD276Q5ZPR3 534 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 GPR139Q6DWJ6 353 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 ZNF620Q6ZNG0 422 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 VTCN1Q7Z7D3 282 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 ERGIC1Q969X5 290 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 WDR76Q9H967 626 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 POMT1Q9Y6A1 747 aa13.91□□□□□ -0.18
MRPL55-220ENST00000411464 LOC100653049A0A140TA62 436 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 KRT34O76011 436 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 NDUFB2O95178 105 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 ZNF682O95780 498 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 LIPFP07098 398 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 MELTFP08582 738 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 NPY4RP50391 375 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 MAPRE2Q15555 327 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 KCNMB1Q16558 191 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 RUSC1-AS1Q66K80 236 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 ZNF841Q6ZN19 808 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 FKBP9P1Q75LS8 142 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-220ENST00000411464 ADCK1Q86TW2 530 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 CELF2-AS1Q8N7Q2 184 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 TBC1D15Q8TC07 691 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 Q8TCH9 128 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 SSMEM1Q8WWF3 244 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 GATAD2BQ8WXI9 593 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 UBE2FQ969M7 185 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 TECTBQ96PL2 329 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 COQ7Q99807 217 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 NUAK2Q9H093 628 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 HDHD2Q9H0R4 259 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 MMADHCQ9H3L0 296 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-220ENST00000411464 VSX1Q9NZR4 365 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-220ENST00000411464 ERVK-18Q9QC07 812 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 TMEM5Q9Y2B1 443 aa13.9□□□□□ -0.18
MRPL55-220ENST00000411464 A0A1B0GWJ7 208 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 C22orf46C9J442 243 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 P2RY10O00398 339 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 SOCS2O14508 198 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 TNFRSF13BO14836 293 aaPredicted RBP13.89□□□□□ -0.19
MRPL55-220ENST00000411464 PTP4A3O75365 173 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 TOX4O94842 621 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 CFHR2P36980 270 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 PSMB10P40306 273 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 RPL15P61313 204 aaKnown RBP13.89□□□□□ -0.19
MRPL55-220ENST00000411464 KLF10Q13118 480 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 MAB21L1Q13394 359 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 KCNJ8Q15842 424 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 IFI44LQ53G44 452 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 PGM2L1Q6PCE3 622 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 CYP4Z1Q86W10 505 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 C19orf18Q8NEA5 215 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 TMEM120AQ9BXJ8 343 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 NRIP3Q9NQ35 241 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 RPS6KA6Q9UK32 745 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 RNF114Q9Y508 228 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 IER3IP1Q9Y5U9 82 aa13.89□□□□□ -0.19
MRPL55-220ENST00000411464 HMGB1P1B2RPK0 211 aaPredicted RBP13.88□□□□□ -0.19
MRPL55-220ENST00000411464 ZNF879B4DU55 563 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 IMPA2O14732 288 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 FAM20BO75063 409 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 SFTPBP07988 381 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 CRABP1P29762 137 aa13.88□□□□□ -0.19
MRPL55-220ENST00000411464 HIST1H3AP68431 136 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms