RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 OR11L1Q8NGX0 322 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 C3orf30Q96M34 536 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 CHST8Q9H2A9 424 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 UQCR10Q9UDW1 63 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 DDNO94850 711 aaPredicted RBP11.81□□□□□ -0.52
COL6A3-206ENST00000409809 DBHP09172 617 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 PSMG4Q5JS54 123 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 DIO2Q92813 273 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 DCAF16Q9NXF7 216 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 SLC5A6Q9Y289 635 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 ZNF256Q9Y2P7 627 aaPredicted RBP11.81□□□□□ -0.52
COL6A3-206ENST00000409809 AKAP6Q13023 2319 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 OR8G3PP0DMU2 310 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 PRLHRP49683 370 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 ERVFRD-1P60508 538 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 UBE2V2Q15819 145 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 ATP6V1FQ16864 119 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 CMC2Q9NRP2 79 aa11.81□□□□□ -0.52
COL6A3-206ENST00000409809 ALOX5APP20292 161 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 HOXC13P31276 330 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 SURF2Q15527 256 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-206ENST00000409809 CYHR1Q6ZMK1 362 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 FAM57BQ71RH2 274 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 NECAP1Q8NC96 275 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 C21orf62-AS1Q17RA5 79 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 LHFPL2Q6ZUX7 228 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 NPWQ8N729 165 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 NEIL2Q969S2 332 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 PDE6DO43924 150 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 CASP6P55212 293 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 GABREP78334 506 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 VDAC3Q9Y277 283 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 SPTBN1Q01082 2364 aaKnown RBP11.8□□□□□ -0.52
COL6A3-206ENST00000409809 IL13RA2Q14627 380 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 DHRS13Q6UX07 377 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 PNPLA1Q8N8W4 532 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 SLC25A43Q8WUT9 341 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-206ENST00000409809 OR5V1Q9UGF6 321 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 FOXJ3Q9UPW0 622 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 ATXN1LP0C7T5 689 aaKnown RBP11.8□□□□□ -0.52
COL6A3-206ENST00000409809 RABIFP47224 123 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 MFAP5Q13361 173 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 TMPRSS13Q9BYE2 586 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 BANF2Q9H503 90 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 ADGRL4Q9HBW9 690 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 AQP7O14520 342 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 GYPBP06028 91 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 TEAD1P28347 426 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 HRH1P35367 487 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 SNU13P55769 128 aaKnown RBP11.8□□□□□ -0.52
COL6A3-206ENST00000409809 RUNX2Q13950 521 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 SHHQ15465 462 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 CARFQ8N187 725 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 EDARADDQ8WWZ3 215 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 NEIL1Q96FI4 390 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-206ENST00000409809 FZD1Q9UP38 647 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 A0A1B0GTQ1 180 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 OR52A4PA6NMU1 304 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 GPR75O95800 540 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 TBX18O95935 607 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 AREGP15514 252 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 POU3F1Q03052 451 aaPredicted RBP11.8□□□□□ -0.52
COL6A3-206ENST00000409809 ZNF628Q5EBL2 1059 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 GLIPR1L1Q6UWM5 242 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 NXPE3Q969Y0 559 aa11.8□□□□□ -0.52
COL6A3-206ENST00000409809 A0A0J9YY10 115 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 SULT1A1P50225 295 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 FAM189BP81408 668 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 TTC32Q5I0X7 151 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 RTL10Q7L3V2 364 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 THNSL2Q86YJ6 484 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 STARD4Q96DR4 205 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 TRBV23OR9-2A0A075B6M9 112 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 MAN2B1O00754 1011 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 MT-ND6P03923 174 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 CD68P34810 354 aaPredicted RBP11.79□□□□□ -0.52
COL6A3-206ENST00000409809 KLHDC7BQ96G42 594 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 OPALINQ96PE5 141 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 RBM38Q9H0Z9 239 aaKnown RBP11.79□□□□□ -0.52
COL6A3-206ENST00000409809 ZNF391Q9UJN7 358 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 EPHX3Q9H6B9 360 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 ELF5Q9UKW6 265 aaPredicted RBP11.79□□□□□ -0.52
COL6A3-206ENST00000409809 LTBP3Q9NS15 1303 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 SOCS6O14544 535 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 CBX7O95931 251 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 SRP14P37108 136 aaKnown RBP11.79□□□□□ -0.52
COL6A3-206ENST00000409809 PHF19Q5T6S3 580 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 SYT9Q86SS6 491 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 GATSQ8NAP1 163 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 EID2BQ96D98 161 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 GAS2L1Q99501 681 aaPredicted RBP11.79□□□□□ -0.52
COL6A3-206ENST00000409809 POLDIP2Q9Y2S7 368 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 NOSIPQ9Y314 301 aaKnown RBP11.79□□□□□ -0.52
COL6A3-206ENST00000409809 LRRC30A6NM36 301 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 CTDSPLO15194 276 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 PTGFRP43088 359 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 LEXMQ3ZCV2 418 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 IRF7Q92985 503 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 SYT11Q9BT88 431 aa11.79□□□□□ -0.52
COL6A3-206ENST00000409809 FEZF1A0PJY2 475 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms