RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 VHLLQ6RSH7 139 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 SLC22A25Q6T423 547 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 TMEM108Q6UXF1 575 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 KBTBD8Q8NFY9 601 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 SPRYD4Q8WW59 207 aaPredicted RBP12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 GATAD2BQ8WXI9 593 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 ASB17Q8WXJ9 295 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 MYDGFQ969H8 173 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 ZNF799Q96GE5 643 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 PSMG3-AS1Q96PY0 264 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 COQ7Q99807 217 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 MROQ9BYG7 248 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 FAM192AQ9GZU8 254 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 DDX28Q9NUL7 540 aaKnown RBP12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 NDUFA13Q9P0J0 144 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 FZR1Q9UM11 496 aa12.2□□□□□ -0.46
CHRNA1-204ENST00000409323 IRGMA1A4Y4 181 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 E9PI62 339 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 RGS10O43665 173 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 ABHD16AO95870 558 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 KRT8P05787 483 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 ANXA2P07355 339 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 ACSM4P0C7M7 580 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 RIDAP52758 137 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 ZNF121P58317 390 aaPredicted RBP12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 ODF4Q2M2E3 257 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 SNAI3Q3KNW1 292 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 NCMAPQ5T1S8 102 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 ZNF684Q5T5D7 378 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 XAF1Q6GPH4 301 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 FAM57BQ71RH2 274 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 ZNF679Q8IYX0 411 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 ABHD4Q8TB40 342 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 MNTQ99583 582 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 KCNJ15Q99712 375 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 KCNS3Q9BQ31 491 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 WACQ9BTA9 647 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 POFUT1Q9H488 388 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 NGBQ9NPG2 151 aa12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 PLEKHB1Q9UF11 243 aaPredicted RBP12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 USP9YO00507 2555 aaPredicted RBP12.19□□□□□ -0.46
CHRNA1-204ENST00000409323 PNMA8CA0A1B0GUJ8 204 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 METTL15A6NJ78 407 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 PHYHO14832 338 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 TBX1O43435 398 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 GPRIN2O60269 458 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 PNPP00491 289 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 PTHP01270 115 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 CRYAAP02489 173 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 ZNF35P13682 527 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 COX6B1P14854 86 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 LOXP28300 417 aaPredicted RBP12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 GTF2A1P52655 376 aaPredicted RBP12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 GRB2P62993 217 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 ROM1Q03395 351 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 EGR3Q06889 387 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 GFOD2Q3B7J2 385 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 CDONQ4KMG0 1287 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 BEX5Q5H9J7 111 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 LIPNQ5VXI9 398 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 RFPL4BQ6ZWI9 263 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 ZFP41Q8N8Y5 198 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 ACBD4Q8NC06 268 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 FAM222BQ8WU58 562 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 IPCEF1Q8WWN9 437 aaPredicted RBP12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 SPTSSAQ969W0 71 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 C4orf45Q96LM5 186 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 ESRP2Q9H6T0 727 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 CHCHD3Q9NX63 227 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 POU2F3Q9UKI9 436 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 EXOSC1Q9Y3B2 195 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 SMIM31A0A1B0GVY4 71 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 A0A1W2PPR1 153 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 MYL12BO14950 172 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 LALBAP00709 142 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 LCATP04180 440 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 CD3EP07766 207 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 COX5BP10606 129 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 PTAFRP25105 342 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 SNTB2Q13425 540 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 KRTAP27-1Q3LI81 207 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 FAM220AQ7Z4H9 259 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 KLBQ86Z14 1044 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 SPARTQ8N0X7 666 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 KLHL36Q8N4N3 616 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 FAM169BQ8N8A8 192 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 OR2AE1Q8NHA4 323 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 PELI1Q96FA3 418 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 OR5M11Q96RB7 305 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 DOK1Q99704 481 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 ZNF319Q9P2F9 582 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 SLC22A13Q9Y226 551 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 ATP23Q9Y6H3 246 aa12.18□□□□□ -0.46
CHRNA1-204ENST00000409323 TMEM269A0A1B0GVZ9 245 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 A6NNC1 897 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 SHISA9B4DS77 424 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 SMPD2O60906 423 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 LCKP06239 509 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 ATP6V1B1P15313 513 aa12.17□□□□□ -0.46
CHRNA1-204ENST00000409323 OTX1P32242 354 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms