RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CLDN1O95832 211 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 WNT11O96014 354 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 B4GALNT1Q00973 533 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 AWAT1Q58HT5 328 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 NCR3LG1Q68D85 454 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 RGS7BPQ6MZT1 257 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF761Q86XN6 746 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-202ENST00000409031 ARHGEF39Q8N4T4 335 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 SLC38A9Q8NBW4 561 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 OR13D1Q8NGV5 346 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 A6NLC8 198 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 WISP3O95389 354 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-202ENST00000409031 CXCL2P19875 107 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 PTGFRP43088 359 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 FAHD2BQ6P2I3 314 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-202ENST00000409031 MOB3CQ70IA8 216 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 DOK3Q7L591 496 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 PSMF1Q92530 271 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 CCDC74AQ96AQ1 378 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 FAHD2AQ96GK7 314 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 OSGIN2Q9Y236 505 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 WSB1Q9Y6I7 421 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 CFDP00746 253 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-202ENST00000409031 HLA-DQB1P01920 261 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 HOXD4P09016 255 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-202ENST00000409031 ACKR3P25106 362 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 NOVA1P51513 510 aaKnown RBP16.05■□□□□ 0.16
SMPD4-202ENST00000409031 PHYHD1Q5SRE7 291 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 AGBL4Q5VU57 503 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 LIMS2Q7Z4I7 341 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 SLC39A11Q8N1S5 342 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 ARRDC3Q96B67 414 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 NKX3-1Q99801 234 aaPredicted RBP16.05■□□□□ 0.16
SMPD4-202ENST00000409031 MOB1AQ9H8S9 216 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 A0A1W2PPH5 198 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 PRSS38A1L453 326 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 C7orf77A4D0Y5 90 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 TRAPPC2LH3BP13 241 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 FFAR1O14842 300 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 QDPRP09417 244 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 BAXQ07812 192 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 GPX8Q8TED1 209 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 LHX4Q969G2 390 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 TM7SF3Q9NS93 570 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 EVPLQ92817 2033 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 M0R143 59 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 HTRA3P83110 453 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF85Q03923 595 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 GPM6BQ13491 265 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF345Q14585 488 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF787Q6DD87 383 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 TMEM91Q6ZNR0 172 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 KLHDC1Q8N7A1 406 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 PIGCQ92535 297 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 SHARPINQ9H0F6 387 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 OR51M1Q9H341 326 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF346Q9UL40 294 aaKnown RBP16.04■□□□□ 0.16
SMPD4-202ENST00000409031 TAF1P21675 1872 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 A0A1W2PPQ1 181 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF542PQ5EBM4 170 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 USP53Q70EK8 1073 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 MISPQ8IVT2 679 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 NUDT22Q9BRQ3 303 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 LPAR3Q9UBY5 353 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 R4GMQ9 66 aa16.04■□□□□ 0.16
SMPD4-202ENST00000409031 FAM74A7A6NL05 159 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 BIDP55957 195 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 PNLIPRP3Q17RR3 467 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 FAM74A3Q4VXF1 159 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 FAM109BQ6ICB4 259 aaPredicted RBP16.03■□□□□ 0.16
SMPD4-202ENST00000409031 BHLHA9Q7RTU4 235 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 LCORQ96JN0 433 aaPredicted RBP16.03■□□□□ 0.16
SMPD4-202ENST00000409031 FAM210BQ96KR6 192 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 NUDT9Q9BW91 350 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 FKRPQ9H9S5 495 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 CBY3A6NI87 242 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 FIGNL2A6NMB9 653 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 RPS27P42677 84 aaKnown RBP16.03■□□□□ 0.16
SMPD4-202ENST00000409031 CATR1Q13166 79 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 ACOT6Q3I5F7 207 aaPredicted RBP16.03■□□□□ 0.16
SMPD4-202ENST00000409031 TMPPEQ6ZT21 453 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 NECAP1Q8NC96 275 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 OR4D9Q8NGE8 314 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 YY2O15391 372 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 PTP4A3O75365 173 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 RABIFP47224 123 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 RPL18Q07020 188 aaKnown RBP16.03■□□□□ 0.16
SMPD4-202ENST00000409031 C1orf140Q5VVS0 124 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF66Q6ZN08 573 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 SEMA6CQ9H3T2 930 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF749O43361 778 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 PNPP00491 289 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 FPR2P25090 351 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF528Q3MIS6 628 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 MARCH3Q86UD3 253 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF611Q8N823 705 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 TOE1Q96GM8 510 aaKnown RBP16.03■□□□□ 0.16
SMPD4-202ENST00000409031 SLCO1C1Q9NYB5 712 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 HAO2Q9NYQ3 351 aa16.03■□□□□ 0.16
SMPD4-202ENST00000409031 CCDC187A0A096LP49 1063 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms