RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ACBD4Q8NC06 268 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 BVESQ8NE79 360 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 CADM4Q8NFZ8 388 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 MFSD8Q8NHS3 518 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 C11orf40Q8WZ69 217 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 MRPS24Q96EL2 167 aaKnown RBP8.75□□□□□ -1.01
MSH2-202ENST00000406134 ZNF768Q9H5H4 540 aaKnown RBP8.75□□□□□ -1.01
MSH2-202ENST00000406134 EXO5Q9H790 373 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 SCPEP1Q9HB40 452 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 RDH8Q9NYR8 311 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 MED11Q9P086 117 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 SUSD2Q9UGT4 822 aa8.75□□□□□ -1.01
MSH2-202ENST00000406134 ZNF107Q9UII5 783 aaPredicted RBP8.75□□□□□ -1.01
MSH2-202ENST00000406134 FXYD6-FXYD2A0A087WZ82 144 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 DBX1A6NMT0 343 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 OR2AT4A6NND4 320 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 RAMP1O60894 148 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 RAB3DO95716 219 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 PMS2P2O95744 297 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 CLDN6P56747 220 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 SLC25A53Q5H9E4 307 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 KCTD18Q6PI47 426 aaPredicted RBP8.74□□□□□ -1.01
MSH2-202ENST00000406134 ATRAIDQ6UW56 229 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 TFAP2EQ6VUC0 442 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 ZNF627Q7L945 461 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 SLC29A4Q7RTT9 530 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 COQ8AQ8NI60 647 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 THRSPQ92748 146 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 NICN1Q9BSH3 213 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 EMC6Q9BV81 110 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 ARL6Q9H0F7 186 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 FXYD6Q9H0Q3 95 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 HHLA2Q9UM44 414 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 GTF2A1LQ9UNN4 478 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 ASCC3Q8N3C0 2202 aaKnown RBP8.74□□□□□ -1.01
MSH2-202ENST00000406134 RP2O75695 350 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 SRFP11831 508 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 CTRB1P17538 263 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 HLA-GP17693 338 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 CRABP1P29762 137 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 ACTBP60709 375 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 ACTG1P63261 375 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 HSF1Q00613 529 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 PHF19Q5T6S3 580 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 GLT8D1Q68CQ7 371 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 CTRB2Q6GPI1 263 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 FJX1Q86VR8 437 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 OR5AS1Q8N127 324 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 ADAD2Q8NCV1 583 aaKnown RBP8.74□□□□□ -1.01
MSH2-202ENST00000406134 EDAQ92838 391 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 CMKLR1Q99788 373 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 TNFSF18Q9UNG2 199 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 RHPN2P1A8MT19 583 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 TMEM14DPA8MWL7 114 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 PI4KAP42356 2102 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 POU3F1Q03052 451 aaPredicted RBP8.74□□□□□ -1.01
MSH2-202ENST00000406134 GK2Q14410 553 aaPredicted RBP8.74□□□□□ -1.01
MSH2-202ENST00000406134 PLPPR5Q32ZL2 321 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 PAPD4Q6PIY7 484 aaKnown RBP8.74□□□□□ -1.01
MSH2-202ENST00000406134 SLC25A42Q86VD7 318 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 RELL2Q8NC24 303 aaPredicted RBP8.74□□□□□ -1.01
MSH2-202ENST00000406134 STEAP2Q8NFT2 490 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 STT3BQ8TCJ2 826 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 ST8SIA1Q92185 356 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 CST11Q9H112 138 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 CHST11Q9NPF2 352 aa8.74□□□□□ -1.01
MSH2-202ENST00000406134 ZFHX4Q86UP3 3567 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 A0A0A6YYH2 397 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 TMEM269A0A1B0GVZ9 245 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 A6NJ64 397 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 CCSO14618 274 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 MSTNO14793 375 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 ZNF208O43345 1280 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 KCNAB3O43448 404 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 AHSA1O95433 338 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 AMY2AP04746 511 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 PGA4P0DJD7 388 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 PGA3P0DJD8 388 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 LIPCP11150 499 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 HNRNPKP61978 463 aaKnown RBP eCLIP8.73□□□□□ -1.01
MSH2-202ENST00000406134 PPP1R1AQ13522 171 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 HIST3H3Q16695 136 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 C4orf46Q504U0 113 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 PLAC9Q5JTB6 97 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 H1FNTQ75WM6 255 aaPredicted RBP8.73□□□□□ -1.01
MSH2-202ENST00000406134 OR52H1Q8NGJ2 320 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 FGGYQ96C11 551 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 SERINC1Q9NRX5 453 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 COPS7AQ9UBW8 275 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 FBXL2Q9UKC9 423 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 CA14Q9ULX7 337 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 VDAC3Q9Y277 283 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 IGLV3-32A0A0A0MS00 114 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 FOXI3A8MTJ6 420 aaPredicted RBP8.73□□□□□ -1.01
MSH2-202ENST00000406134 MBTPS2O43462 519 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 LRFN4Q6PJG9 635 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 DEGS2Q6QHC5 323 aa8.73□□□□□ -1.01
MSH2-202ENST00000406134 WDR74Q6RFH5 385 aaPredicted RBP8.73□□□□□ -1.01
MSH2-202ENST00000406134 THAP3Q8WTV1 239 aaPredicted RBP8.73□□□□□ -1.01
MSH2-202ENST00000406134 NUDCD2Q8WVJ2 157 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms