RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 AQP7P3A6NL99 342 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 NXPH2O95156 264 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 YES1P07947 543 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 AKR1C4P17516 323 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 MRPS10P82664 201 aaKnown RBP8.11□□□□□ -1.11
LIG4-202ENST00000405925 GPR176Q14439 515 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 OR1F12Q8NHA8 337 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 RAB3CQ96E17 227 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 CMSS1Q9BQ75 279 aaKnown RBP8.11□□□□□ -1.11
LIG4-202ENST00000405925 SCNM1Q9BWG6 230 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 BANF2Q9H503 90 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 CPNE5Q9HCH3 593 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 FKBP14Q9NWM8 211 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 RABL2AQ9UBK7 228 aaPredicted RBP8.11□□□□□ -1.11
LIG4-202ENST00000405925 STEAP1Q9UHE8 339 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 RABL2BQ9UNT1 228 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 KNG1P01042 644 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 UMODP07911 640 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 ANXA3P12429 323 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 IL7P13232 177 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 FAHP16930 419 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 RPS4Y1P22090 263 aaKnown RBP8.11□□□□□ -1.11
LIG4-202ENST00000405925 CPT2P23786 658 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 CRYBA2P53672 197 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 OR10A3P58181 314 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 PSMA6P60900 246 aaKnown RBP8.11□□□□□ -1.11
LIG4-202ENST00000405925 S100A10P60903 97 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 ZNF169Q14929 603 aaPredicted RBP8.11□□□□□ -1.11
LIG4-202ENST00000405925 GSG1Q2KHT4 349 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 LRRC37A5PQ49AS3 106 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 CD163Q86VB7 1156 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 OR1M1Q8NGA1 313 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 OR56B1Q8NGI3 324 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 OR10K1Q8NGX5 313 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 ASB10Q8WXI3 467 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 REEP6Q96HR9 211 aa8.11□□□□□ -1.11
LIG4-202ENST00000405925 ZNF385AQ96PM9 386 aaKnown RBP8.11□□□□□ -1.11
LIG4-202ENST00000405925 RALGAPA1Q6GYQ0 2036 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 FXYD6-FXYD2A0A087WZ82 144 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 HSPB2A8KAH6 182 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 ZFPL1O95159 310 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 GSTT2P0CG29 244 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 CD53P19397 219 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 IL11P20809 199 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 TGM4P49221 684 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 MAB21L1Q13394 359 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 HSPB2Q16082 182 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 WDR38Q5JTN6 314 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 UBE2NLQ5JXB2 153 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 XAF1Q6GPH4 301 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 ZNF774Q6NX45 483 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 CCDC71Q8IV32 467 aaPredicted RBP8.1□□□□□ -1.11
LIG4-202ENST00000405925 FDCSPQ8NFU4 85 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 SLC25A46Q96AG3 418 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 NARS2Q96I59 477 aaKnown RBP8.1□□□□□ -1.11
LIG4-202ENST00000405925 JAM3Q9BX67 310 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 FXYD6Q9H0Q3 95 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 PTTG3PQ9NZH4 202 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 GMEB1Q9Y692 573 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 ALOX5APP20292 161 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 RBP2P50120 134 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 PABPC1L2AQ5JQF8 200 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 ZNF770Q6IQ21 691 aaPredicted RBP8.1□□□□□ -1.11
LIG4-202ENST00000405925 ADGRE4PQ86SQ3 457 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 KCNJ15Q99712 375 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 SF3B5Q9BWJ5 86 aaKnown RBP8.1□□□□□ -1.11
LIG4-202ENST00000405925 PCDHB10Q9UN67 800 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 RBMX2Q9Y388 322 aaKnown RBP8.1□□□□□ -1.11
LIG4-202ENST00000405925 ATP23Q9Y6H3 246 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 DNAH12Q6ZR08 3092 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 LOC100289279A0A1B0GTE1 492 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 SLC34A2O95436 690 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 PMS2P2O95744 297 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 PTTG1O95997 202 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 TMIGD3P0DMS9 266 aaPredicted RBP8.1□□□□□ -1.11
LIG4-202ENST00000405925 CALCBP10092 127 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 GABRA1P14867 456 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 EXOSC6Q5RKV6 272 aaKnown RBP8.1□□□□□ -1.11
LIG4-202ENST00000405925 OR10K2Q6IF99 312 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 OR4M1Q8NGD0 313 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 OR11L1Q8NGX0 322 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 YIPF6Q96EC8 236 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 C4orf45Q96LM5 186 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 ZCCHC4Q9H5U6 513 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 NDRG3Q9UGV2 375 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 CACNG2Q9Y698 323 aa8.1□□□□□ -1.11
LIG4-202ENST00000405925 INTS1Q8N201 2190 aaKnown RBP8.1□□□□□ -1.11
LIG4-202ENST00000405925 A0A0B4J203 849 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 E9PI62 339 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 L7N2F9 121 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 XRCC2O43543 280 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 SEMG1P04279 462 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 SFTPBP07988 381 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 CSF1P09603 554 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 ZNF17P17021 662 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 MAGEB1P43366 347 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 RPS23P62266 143 aaKnown RBP8.09□□□□□ -1.11
LIG4-202ENST00000405925 VAMP2P63027 116 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 Q6ZTK2 550 aa8.09□□□□□ -1.11
LIG4-202ENST00000405925 IMMP1LQ96LU5 166 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms