RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 RBPJQ06330 500 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 HNRNPA0Q13151 305 aaKnown RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 TRAM1Q15629 374 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 STK11Q15831 433 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SLC36A2Q495M3 483 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 YIF1BQ5BJH7 314 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 PABPC1L2AQ5JQF8 200 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SFRP5Q5T4F7 317 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 CATSPERDQ86XM0 798 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ALDH16A1Q8IZ83 802 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 ZNF610Q8N9Z0 462 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 KDF1Q8NAX2 398 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 IL17RDQ8NFM7 739 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 OR6K3Q8NGY3 331 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 MBD3L2Q8NHZ7 208 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 GPR148Q8TDV2 347 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 SPTSSAQ969W0 71 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TMEM106AQ96A25 262 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 COQ7Q99807 217 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 OR2H1Q9GZK4 316 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 PBOV1Q9GZY1 135 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 TP63Q9H3D4 680 aaPredicted RBP3.25□□□□□ -1.89
RTN4-208ENST00000404909 NOX4Q9NPH5 578 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 G6PC2Q9NQR9 355 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 FAM206AQ9NX38 181 aa3.25□□□□□ -1.89
RTN4-208ENST00000404909 MYO18BQ8IUG5 2567 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 ESPL1Q14674 2120 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 TRGV8A0A0C4DH27 118 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 LOC107986453A0A1B0GWG9 222 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 ZNF503-AS2A6NEH8 195 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 TRIM64BA6NI03 449 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 HSPB2A8KAH6 182 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 M0R135 149 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 RGS5O15539 181 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 TNFSF13O75888 250 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 IGHV1-2P23083 117 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 ANOS1P23352 680 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 PAX7P23759 505 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 APEX1P27695 318 aaKnown RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 UGT2B10P36537 528 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 RORCP51449 518 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 MMP16P51512 607 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 BMXP51813 675 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 PSMA6P60900 246 aaKnown RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 RAB1AP62820 205 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 RAB35Q15286 201 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 HSPB2Q16082 182 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 Q499Y3 187 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 HSD17B12Q53GQ0 312 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 C1QTNF12Q5T7M4 302 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 Q6ZT83 130 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 ZNF433Q8N7K0 673 aaPredicted RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 OR1F12Q8NHA8 337 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 MCFD2Q8NI22 146 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 OR51E1Q8TCB6 317 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 STARD4Q96DR4 205 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 ZNF799Q96GE5 643 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 PGAM5Q96HS1 289 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 KCNJ15Q99712 375 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 C1QTNF6Q9BXI9 259 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 WNT5BQ9H1J7 359 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 DHDHQ9UQ10 334 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 PMF1-BGLAPU3KQ54 211 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 ICE1Q9Y2F5 2266 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 C5orf49A4QMS7 147 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 C5orf63A6NC05 138 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 EEF1E1-BLOC1S5C9J1V9 151 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 EEF1E1O43324 174 aaKnown RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 SYT7O43581 403 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 SRSF10O75494 262 aaKnown RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 ARL6IP5O75915 188 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 CLPXO76031 633 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 LCATP04180 440 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 MAS1P04201 325 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 GLI4P10075 376 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 SRMP19623 302 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 HOXC12P31275 282 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 CCR9P51686 369 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 OR10A3P58181 314 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 UBE2NP61088 152 aaKnown RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 GUSBP1Q15486 140 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 RSPO1Q2MKA7 263 aaPredicted RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 TBRG1Q3YBR2 411 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 ZNF404Q494X3 552 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 ANKRD16Q6P6B7 361 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 PAMR1Q6UXH9 720 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 ZNF704Q6ZNC4 412 aaPredicted RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 RHOUQ7L0Q8 258 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 CPEB3Q8NE35 698 aaKnown RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 OR8B12Q8NGG6 310 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 OR1K1Q8NGR3 316 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 OR13C3Q8NGS6 347 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 SLC25A46Q96AG3 418 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 MS4A3Q96HJ5 214 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 FAM71F1Q96KD3 344 aaPredicted RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 DACH2Q96NX9 599 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 SLIRPQ9GZT3 109 aaKnown RBP3.24□□□□□ -1.89
RTN4-208ENST00000404909 HDHD2Q9H0R4 259 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 NIPAL2Q9H841 368 aa3.24□□□□□ -1.89
RTN4-208ENST00000404909 TCF7L1Q9HCS4 588 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms