RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 RAB8AP61006 207 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 BTN3A2P78410 334 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 IL1RL1Q01638 556 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 TNFRSF17Q02223 184 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 FUT7Q11130 342 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 DEFB110Q30KQ9 67 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 C15orf32Q32M92 178 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 DNAL1Q4LDG9 190 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 DEFB134Q4QY38 66 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 CPTPQ5TA50 214 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 ANXA8L1Q5VT79 327 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR52E8Q6IFG1 317 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 SLC48A1Q6P1K1 146 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 ATRAIDQ6UW56 229 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 ARPINQ7Z6K5 226 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 P2RY8Q86VZ1 359 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 KRTCAP2Q8N6L1 136 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 DEFB124Q8NES8 71 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 BEST4Q8NFU0 473 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR9I1Q8NGQ6 314 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR52J3Q8NH60 311 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 PPCDCQ96CD2 204 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 ITCHQ96J02 903 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 TEX37Q96LM6 180 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 CCDC115Q96NT0 180 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR52E6Q96RD3 313 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 HOPXQ9BPY8 73 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 FAM173AQ9BQD7 235 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 NDUFAF3Q9BU61 184 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 DDA1Q9BW61 102 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 EBPLQ9BY08 206 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 TMEM231Q9H6L2 316 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 RPF2Q9H7B2 306 aaKnown RBP3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 SYNDIG1Q9H7V2 258 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 RMND5AQ9H871 391 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 MIEF1Q9NQG6 463 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 CENPMQ9NSP4 180 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 CUTCQ9NTM9 273 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 TAS2R1Q9NYW7 299 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 CCDC167Q9P0B6 97 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 CES1P1Q9UKY3 287 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 MRPS33Q9Y291 106 aaKnown RBP3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 PLEKHA6Q9Y2H5 1048 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 AP3M1Q9Y2T2 418 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 NAALAD2Q9Y3Q0 740 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 GMEB1Q9Y692 573 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 DMXL1Q9Y485 3027 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 SPTBN2O15020 2390 aa3.8□□□□□ -1.8
HMGB3P19-201ENST00000403971 ACACAQ13085 2346 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 NOTCH3Q9UM47 2321 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 SPTBN4Q9H254 2564 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 HEATR5AQ86XA9 2040 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 IGLV3-12A0A075B6K2 115 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 A0A096LPI6 279 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 A0A0G2JN53 185 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 LOC100653049A0A140TA62 436 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 EFCAB7A8K855 629 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 MRASO14807 208 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 BCL2L11O43521 198 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 CHST10O43529 356 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 CTNSO60931 367 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 RDH16O75452 317 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 SCRG1O75711 98 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 KRT34O76011 436 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 KBTBD11O94819 623 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 LRATO95237 230 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 GPR75O95800 540 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 AIFM1O95831 613 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 NUDT14O95848 222 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 STATHP02808 62 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 KRT16P08779 473 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 LAMP1P11279 417 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 CPN2P22792 545 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 PPIBP23284 216 aaKnown RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 PTPN6P29350 595 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 MPIP34949 423 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 MAGEA8P43361 318 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 POU3F4P49335 361 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 HSD17B7P56937 341 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 NCALDP61601 193 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 IGLV3-21P80748 117 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 DCDP81605 110 aaKnown RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 ART3Q13508 389 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZNF239Q16600 458 aaKnown RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 ZSWIM7Q19AV6 140 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 TRMT5Q32P41 509 aaKnown RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 VPS26BQ4G0F5 336 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 PAGE3Q5JUK9 113 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 HES3Q5TGS1 186 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR4F3Q6IEY1 312 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 CCBE1Q6UXH8 406 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 PGAM4Q8N0Y7 254 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 CA13Q8N1Q1 262 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 PLPP5Q8NEB5 264 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR4K14Q8NGD5 310 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR9A4Q8NGU2 314 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 OR51Q1Q8NH59 317 aa3.79□□□□□ -1.8
HMGB3P19-201ENST00000403971 CLHC1Q8NHS4 586 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms