RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	ZER1	Q7Z7L7	766 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	RANBP3L	Q86VV4	465 aa	Predicted RBP	5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ZNF584	Q8IVC4	421 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SKA3	Q8IX90	412 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	DEFB108B	Q8NET1	73 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	OR1J1	Q8NGS3	322 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	OR4F5	Q8NH21	305 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	OR6X1	Q8NH79	312 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TMIGD2	Q96BF3	282 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SLC25A44	Q96H78	314 aa	Predicted RBP	5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ZNF75A	Q96N20	296 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TSPAN32	Q96QS1	320 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SH3GL3	Q99963	347 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SLC30A2	Q9BRI3	323 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	MMP27	Q9H306	513 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	EVA1A	Q9H8M9	152 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	CCNB1IP1	Q9NPC3	277 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	A4GALT	Q9NPC4	353 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	LIN7C	Q9NUP9	197 aa	Known RBP	5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ARL8B	Q9NVJ2	186 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TMEM38B	Q9NVV0	291 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	AIG1	Q9NVV5	245 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ZNF224	Q9NZL3	707 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	KIF17	Q9P2E2	1029 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	LGALS13	Q9UHV8	139 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	LEF1	Q9UJU2	399 aa	Predicted RBP	5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	MMP24	Q9Y5R2	645 aa		5.67	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TENM1	Q9UKZ4	2725 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	PCNX3	Q9H6A9	2034 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	IGKV1D-42	A0A075B6H8	117 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461		A0A0B4J2E0	115 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461		A0A1B0GX12	115 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	WDR91	A4D1P6	747 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TRPC5OS	A6NMA1	111 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	MCIDAS	D6RGH6	385 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	C11orf98	E9PRG8	122 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	PLPP3	O14495	311 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	BIRC5	O15392	142 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	RNF13	O43567	381 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SLC22A3	O75751	556 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	MFN2	O95140	757 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TGDS	O95455	350 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	HPR	P00739	348 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	IGHV1-46	P01743	117 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	C1QC	P02747	245 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	BGLAP	P02818	100 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	HIST1H2AB	P04908	130 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SBK2	P0C263	348 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	NR2C1	P13056	603 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	CCL2	P13500	99 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ETS2	P15036	469 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ZNF12	P17014	697 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	CPT2	P23786	658 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	GDI2	P50395	445 aa	Known RBP	5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ARHGDIA	P52565	204 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ERVS71-1	P61550	626 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	STX3	Q13277	289 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SEC23B	Q15437	767 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SLC9A3R2	Q15599	337 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TMEM155	Q4W5P6	130 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	CEP78	Q5JTW2	689 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	GCNT6	Q5T4J0	391 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	LEG1	Q6P5S2	330 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ARL9	Q6T311	187 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SLC35D2	Q76EJ3	337 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	HIST3H2A	Q7L7L0	130 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	MUC20	Q8N307	709 aa	Predicted RBP	5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	OR4K5	Q8NGD3	323 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	OR52E2	Q8NGJ4	325 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	OR5J2	Q8NH18	312 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	HIST1H2AC	Q93077	130 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TMEM54	Q969K7	222 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	THOC1	Q96FV9	657 aa	Known RBP	5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TXNDC15	Q96J42	360 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TEX37	Q96LM6	180 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ZNF607	Q96SK3	696 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	PKP2	Q99959	881 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TMEM43	Q9BTV4	400 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	C1QTNF5	Q9BXJ0	243 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ROPN1B	Q9BZX4	212 aa	Predicted RBP	5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	MEAF6	Q9HAF1	191 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ROPN1	Q9HAT0	212 aa	Predicted RBP	5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	STX18	Q9P2W9	335 aa	Known RBP	5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	IL20RA	Q9UHF4	553 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	RAB21	Q9UL25	225 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	NPTN	Q9Y639	398 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	CACNG2	Q9Y698	323 aa		5.66	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ARFGEF3	Q5TH69	2177 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461		A0A1W2PRG6	482 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461	GMNC	A6NCL1	334 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461	HMX3	A6NHT5	357 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461		H3BSA7	217 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SURF4	O15260	269 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TM9SF1	O15321	606 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ITM2A	O43736	263 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461	TYROBP	O43914	113 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461	SERPINB7	O75635	380 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461	QDPR	P09417	244 aa		5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461	ALDOC	P09972	364 aa	Known RBP	5.65	□□□□□ -1.5
CEACAM1-208	ENST00000403461	PPIAL4G	P0DN37	164 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms