RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TUBG1P23258 451 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 GATA4P43694 442 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 SRP9P49458 86 aaKnown RBP9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 EFNB2P52799 333 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 MTPNP58546 118 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CTXN1P60606 82 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PIN1Q13526 163 aaPredicted RBP9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 HERPUD1Q15011 391 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ALG10Q5BKT4 473 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 SFRP4Q6FHJ7 346 aaPredicted RBP9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 DHRS7BQ6IAN0 325 aaPredicted RBP9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ARL9Q6T311 187 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 EPGNQ6UW88 154 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 GDPGP1Q6ZNW5 385 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 HDDC2Q7Z4H3 204 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PNKDQ8N490 385 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PCYOX1LQ8NBM8 494 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 TMEM239Q8WW34 195 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 RBP7Q96R05 134 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 EBF4Q9BQW3 602 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 TUBG2Q9NRH3 451 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 UFSP2Q9NUQ7 469 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CCDC167Q9P0B6 97 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 RIMS3Q9UJD0 308 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 VPREB3Q9UKI3 123 aa9.77□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CTLA4P16410 223 aa9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PPIBP23284 216 aaKnown RBP9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 RBM34P42696 430 aaKnown RBP9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 POU4F2Q12837 409 aa9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 INTS11Q5TA45 600 aaKnown RBP9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 C1orf122Q6ZSJ8 110 aa9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 MICU2Q8IYU8 434 aa9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 C11orf65Q8NCR3 313 aa9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 OR1F12Q8NHA8 337 aa9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PHF21AQ96BD5 680 aa9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 NECAP2Q9NVZ3 263 aa9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 STX18Q9P2W9 335 aaKnown RBP9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 FBLN5Q9UBX5 448 aa9.76□□□□□ -0.85
SPTLC1P3-201ENST00000403408 TRAV27A0A087WT01 109 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 A0A1W2PRD5 423 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 A0A1W2PRF3 423 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 A0A1W2PRM7 423 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 K7EIL1 84 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 RER1O15258 196 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CD200P41217 278 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 SCRN3Q0VDG4 424 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 KLRD1Q13241 179 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 MESTQ5EB52 335 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 METTL11BQ5VVY1 283 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 BTN2A1Q7KYR7 527 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 VMO1Q7Z5L0 202 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 SCCPDHQ8NBX0 429 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 C17orf50Q8WW18 174 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 AJUBAQ96IF1 538 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ZNF582Q96NG8 517 aaPredicted RBP9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ECSITQ9BQ95 431 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 MMADHCQ9H3L0 296 aaPredicted RBP9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ADAM18Q9Y3Q7 739 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 USH1CQ9Y6N9 552 aa9.75□□□□□ -0.85
SPTLC1P3-201ENST00000403408 GMNCA6NCL1 334 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 LRRC30A6NM36 301 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 EVPLLA8MZ36 301 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 RNASEK-C17orf49H0YIS7 233 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 LGALS8O00214 317 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ADAM20O43506 726 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 OR5F1O95221 314 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 GYPAP02724 150 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 LIPFP07098 398 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 FPR3P25089 353 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 IDH3AP50213 366 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 NPY4RP50391 375 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 KRTAP27-1Q3LI81 207 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 AGKQ53H12 422 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 CD276Q5ZPR3 534 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 COLCA1Q6ZS62 124 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 NAA40Q86UY6 237 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 FAM90A1Q86YD7 464 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 C1orf87Q8N0U7 546 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 MREGQ8N565 214 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 Q8N7P7 452 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 BOLLQ8N9W6 283 aaKnown RBP9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 LY6G5BQ8NDX9 201 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 OR51A7Q8NH64 312 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 MAGEB18Q96M61 343 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 Q96M85 177 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 MMP28Q9H239 520 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PPA2Q9H2U2 334 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 DPAGT1Q9H3H5 408 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 KAT8Q9H7Z6 458 aaKnown RBP9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 TMEM100Q9NV29 134 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 ERVK-18Q9QC07 812 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 DNAJB11Q9UBS4 358 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 SH3GLB1Q9Y371 365 aa9.74□□□□□ -0.85
SPTLC1P3-201ENST00000403408 TMEM120BA0PK00 339 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 DVL1O14640 695 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 PAX6P26367 422 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 GABRA5P31644 462 aa9.73□□□□□ -0.85
SPTLC1P3-201ENST00000403408 TGFBR2P37173 567 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms