RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 H3BP45 60 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 APOBEC1P41238 236 aaKnown RBP12.51□□□□□ -0.41
VAPA-202ENST00000400000 CLVS2Q5SYC1 327 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 C16orf52Q8NHV5 167 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 RPUSD4Q96CM3 377 aaKnown RBP12.51□□□□□ -0.41
VAPA-202ENST00000400000 LRFN3Q9BTN0 628 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 ZDHHC5Q9C0B5 715 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 GAL3ST2Q9H3Q3 398 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 FBXO8Q9NRD0 319 aa12.51□□□□□ -0.41
VAPA-202ENST00000400000 M0R135 149 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 DBPQ10586 325 aaPredicted RBP12.5□□□□□ -0.41
VAPA-202ENST00000400000 C16orf47Q6ZP98 133 aaPredicted RBP12.5□□□□□ -0.41
VAPA-202ENST00000400000 OR1J1Q8NGS3 322 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 ZNF799Q96GE5 643 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 DHRS4Q9BTZ2 278 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 DAPP1Q9UN19 280 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 DCTN6O00399 190 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 SLC16A6O15403 523 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 FAM71E1Q6IPT2 247 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 ACOT7LQ6ZUV0 252 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 CISD2Q8N5K1 135 aaKnown RBP12.5□□□□□ -0.41
VAPA-202ENST00000400000 OR5H6Q8NGV6 325 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 YIPF5Q969M3 257 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 MISP3Q96FF7 219 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 OR8B4Q96RC9 309 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 ARPC4-TTLL3A0A0A6YYG9 625 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 FCMRO60667 390 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 CR2P20023 1033 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 TOR2AQ5JU69 321 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 FAM74A1Q5RGS3 127 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 SVBPQ8N300 66 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 MOB3AQ96BX8 217 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 AK3Q9UIJ7 227 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 FLVCR1Q9Y5Y0 555 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 FAM157AC9JC47 383 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 HMGA1P17096 107 aaKnown RBP12.5□□□□□ -0.41
VAPA-202ENST00000400000 RAP2BP61225 183 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 RPL18Q07020 188 aaKnown RBP12.5□□□□□ -0.41
VAPA-202ENST00000400000 GAMTQ14353 236 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 AGERQ15109 404 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 OR52I2Q8NH67 350 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 NUDCD2Q8WVJ2 157 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 ISG20L2Q9H9L3 353 aaKnown RBP12.5□□□□□ -0.41
VAPA-202ENST00000400000 SETD1AO15047 1707 aaKnown RBP12.5□□□□□ -0.41
VAPA-202ENST00000400000 B3GALNT1O75752 331 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 SUB1P53999 127 aaKnown RBP eCLIP12.5□□□□□ -0.414e-15■■□□□ 12
VAPA-202ENST00000400000 TBCEQ15813 527 aaPredicted RBP12.5□□□□□ -0.41
VAPA-202ENST00000400000 ACSM5Q6NUN0 579 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 CA13Q8N1Q1 262 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 NPEPL1Q8NDH3 523 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
VAPA-202ENST00000400000 MBOAT4Q96T53 435 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 PLEKHB1Q9UF11 243 aaPredicted RBP12.5□□□□□ -0.41
VAPA-202ENST00000400000 TIMM10BQ9Y5J6 103 aa12.5□□□□□ -0.41
VAPA-202ENST00000400000 A0A0D9SG52 128 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 NUDT19A8MXV4 375 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 GPR171O14626 319 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 ELK1P19419 428 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 SOHLH1Q5JUK2 328 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 STUMQ69YW2 141 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 RFPL4BQ6ZWI9 263 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 CCL17Q92583 94 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 KLF13Q9Y2Y9 288 aaPredicted RBP12.49□□□□□ -0.41
VAPA-202ENST00000400000 POMT1Q9Y6A1 747 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 NKX2-1P43699 371 aaPredicted RBP12.49□□□□□ -0.41
VAPA-202ENST00000400000 ZNF133P52736 654 aaPredicted RBP12.49□□□□□ -0.41
VAPA-202ENST00000400000 GGTA1PQ4G0N0 100 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 LPCAT3Q6P1A2 487 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 TFAP2EQ6VUC0 442 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 C17orf107Q6ZR85 190 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 HIST2H3AQ71DI3 136 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 LRP5LA4QPB2 252 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 GLAP06280 429 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 APELAP0DMC3 54 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 COX7A1P24310 79 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 LIPAP38571 399 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 ST8SIA2Q92186 375 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 KISS1RQ969F8 398 aaPredicted RBP12.49□□□□□ -0.41
VAPA-202ENST00000400000 IKZF5Q9H5V7 419 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 CNR1P21554 472 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 SNRPNP63162 240 aaKnown RBP12.49□□□□□ -0.41
VAPA-202ENST00000400000 CLN3Q13286 438 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 HAVCR2Q8TDQ0 301 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 GNRHR2Q96P88 292 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 TEAD3Q99594 435 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 SOX7Q9BT81 388 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 UBTD1Q9HAC8 227 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 SLX4Q8IY92 1834 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 ZNF195O14628 629 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 CRXO43186 299 aaPredicted RBP12.49□□□□□ -0.41
VAPA-202ENST00000400000 SPINK4O60575 86 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 C3AR1Q16581 482 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 AGBL4Q5VU57 503 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 BTLAQ7Z6A9 289 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 OR1M1Q8NGA1 313 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 LYSMD1Q96S90 227 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 BCO1Q9HAY6 547 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 ISYNA1Q9NPH2 558 aa12.49□□□□□ -0.41
VAPA-202ENST00000400000 ZNF121P58317 390 aaPredicted RBP12.48□□□□□ -0.41
VAPA-202ENST00000400000 DTWD2Q8NBA8 298 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms