RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 NUFIP1Q9UHK0 495 aaKnown RBP6.48□□□□□ -1.37
USP16-204ENST00000399976 ZDHHC8Q9ULC8 765 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 TRIM64A6NGJ6 449 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 NDUFS8O00217 210 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 ALX3O95076 343 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 MT-ND5P03915 603 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 ISG15P05161 165 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 TACSTD2P09758 323 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 WNT5AP41221 380 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 SELENOVP59797 346 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 EIF2B1Q14232 305 aaKnown RBP6.48□□□□□ -1.37
USP16-204ENST00000399976 OR8B8Q15620 311 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 MST1LQ2TV78 715 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 RBM48Q5RL73 367 aaKnown RBP6.48□□□□□ -1.37
USP16-204ENST00000399976 TMEM236Q5W0B7 351 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 RGS7BPQ6MZT1 257 aaPredicted RBP6.48□□□□□ -1.37
USP16-204ENST00000399976 ZNF774Q6NX45 483 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 SPERTQ8NA61 448 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 OR9Q1Q8NGQ5 310 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 OR52N1Q8NH53 320 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 SMAP2Q8WU79 429 aaPredicted RBP6.48□□□□□ -1.37
USP16-204ENST00000399976 TSSK2Q96PF2 358 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 MS4A5Q9H3V2 200 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 CISD1Q9NZ45 108 aaKnown RBP6.48□□□□□ -1.37
USP16-204ENST00000399976 LRCH1Q9Y2L9 728 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 POLR1DQ9Y2S0 133 aa6.48□□□□□ -1.37
USP16-204ENST00000399976 TMEM129A0AVI4 362 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 M0R135 149 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 FADS2O95864 444 aaKnown RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 ZNF91Q05481 1191 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 CDK5R2Q13319 367 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 GALEQ14376 348 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 ZNF787Q6DD87 383 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 DCXRQ7Z4W1 244 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 LRRC18Q8N456 261 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 CSNK2A3Q8NEV1 391 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 OR6K6Q8NGW6 343 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 ZNF799Q96GE5 643 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 NR1H4Q96RI1 486 aaPredicted RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 ZNF649Q9BS31 505 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 MRPL15Q9P015 296 aaKnown RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 LAMP5Q9UJQ1 280 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 CAB39Q9Y376 341 aaPredicted RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 SNX5Q9Y5X3 404 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 PMF1-BGLAPU3KQ54 211 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 ATP6V1G2-DDX39BF2Z307 99 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 ERCC1P07992 297 aaPredicted RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 SERPINF1P36955 418 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 PPP1CBP62140 327 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 SNRPD2P62316 118 aaKnown RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 MALLQ13021 153 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 TESK1Q15569 626 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 C9orf135Q5VTT2 229 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 SLC22A25Q6T423 547 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 SPNS3Q6ZMD2 512 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 CDH24Q86UP0 819 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 MYPOPQ86VE0 399 aaPredicted RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 TMEM200AQ86VY9 491 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 ERI1Q8IV48 349 aaKnown RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 ACBD7Q8N6N7 88 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 OR6N2Q8NGY6 317 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 ZNF184Q99676 751 aaPredicted RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 REPIN1Q9BWE0 567 aaKnown RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 CDCA4Q9BXL8 241 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 FAM206AQ9NX38 181 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 R4GMQ9 66 aa6.47□□□□□ -1.37
USP16-204ENST00000399976 USP9YO00507 2555 aaPredicted RBP6.47□□□□□ -1.37
USP16-204ENST00000399976 A0A1W2PPR1 153 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 METTL15A6NJ78 407 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 ENTPD6O75354 484 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 CD8AP01732 235 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 HLA-DQA2P01906 255 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 CELA3BP08861 270 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 GIFP27352 417 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 APEX1P27695 318 aaKnown RBP6.46□□□□□ -1.37
USP16-204ENST00000399976 POLR2IP36954 125 aaKnown RBP6.46□□□□□ -1.37
USP16-204ENST00000399976 GATA4P43694 442 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 FABP6P51161 128 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 RIDAP52758 137 aaKnown RBP6.46□□□□□ -1.37
USP16-204ENST00000399976 KLF3P57682 345 aaPredicted RBP6.46□□□□□ -1.37
USP16-204ENST00000399976 TAS2R43P59537 309 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 SNTB2Q13425 540 aaKnown RBP6.46□□□□□ -1.37
USP16-204ENST00000399976 GPR50Q13585 617 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 DEFB113Q30KQ7 82 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 MUC15Q8N387 334 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 BBS1Q8NFJ9 593 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 SYNPRQ8TBG9 265 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 TRMT61AQ96FX7 289 aaKnown RBP6.46□□□□□ -1.37
USP16-204ENST00000399976 MROQ9BYG7 248 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 SEBOXQ9HB31 216 aaPredicted RBP6.46□□□□□ -1.37
USP16-204ENST00000399976 PSORS1C1Q9UIG5 152 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 ATP23Q9Y6H3 246 aa6.46□□□□□ -1.37
USP16-204ENST00000399976 FAM183AA6NL82 134 aa6.46□□□□□ -1.38
USP16-204ENST00000399976 RER1O15258 196 aa6.46□□□□□ -1.38
USP16-204ENST00000399976 MPZL1O95297 269 aa6.46□□□□□ -1.38
USP16-204ENST00000399976 CST4P01036 141 aa6.46□□□□□ -1.38
USP16-204ENST00000399976 ACAA1P09110 424 aaPredicted RBP6.46□□□□□ -1.38
USP16-204ENST00000399976 SPARCP09486 303 aa6.46□□□□□ -1.38
USP16-204ENST00000399976 H2BFMP0C1H6 154 aa6.46□□□□□ -1.38
USP16-204ENST00000399976 CLUP10909 449 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms