RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TRIM64BA6NI03 449 aa12.55□□□□□ -0.4
SCAF4-202ENST00000399804 OR7C1O76099 320 aaPredicted RBP12.55□□□□□ -0.4
SCAF4-202ENST00000399804 ECH1Q13011 328 aa12.55□□□□□ -0.4
SCAF4-202ENST00000399804 STEAP1BQ6NZ63 245 aa12.55□□□□□ -0.4
SCAF4-202ENST00000399804 IDO2Q6ZQW0 420 aa12.55□□□□□ -0.4
SCAF4-202ENST00000399804 STEAP2Q8NFT2 490 aa12.55□□□□□ -0.4
SCAF4-202ENST00000399804 OR56B1Q8NGI3 324 aa12.55□□□□□ -0.4
SCAF4-202ENST00000399804 FBXO9Q9UK97 447 aaPredicted RBP12.55□□□□□ -0.4
SCAF4-202ENST00000399804 TIMM10BQ9Y5J6 103 aa12.55□□□□□ -0.4
SCAF4-202ENST00000399804 OR2AT4A6NND4 320 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 M0QYG6 137 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 HPP00738 406 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 IL11P20809 199 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 ADH6P28332 368 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 CD34P28906 385 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 TNK1Q13470 666 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 GLCCI1Q86VQ1 547 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 ASB10Q8WXI3 467 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 CCDC120Q96HB5 630 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 PRRT1Q99946 306 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 AUNIPQ9H7T9 357 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 MOB1AQ9H8S9 216 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 QPCTLQ9NXS2 382 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 LTBP2Q14767 1821 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 TICRRQ7Z2Z1 1910 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 KANTRA0A1W2PQU2 76 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 LNP1A1A4G5 178 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 GP1BAP07359 652 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 PTHLHP12272 177 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 RRAS2P62070 204 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-202ENST00000399804 MEF2DQ14814 521 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 OR10D3Q8NH80 312 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 AKR7LQ8NHP1 331 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 METTL9Q9H1A3 318 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 PLSCR3Q9NRY6 295 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 FRRS1LQ9P0K9 344 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 TRAPPC4Q9Y296 219 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 PRKACBP22694 351 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 GABRA4P48169 554 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 RIN1Q13671 783 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 RBMS2Q15434 407 aaKnown RBP12.54□□□□□ -0.4
SCAF4-202ENST00000399804 SHBQ15464 509 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 FCN2Q15485 313 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 MRGPREQ86SM8 312 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 VASH2Q86V25 355 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 GTPBP8Q8N3Z3 284 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-202ENST00000399804 BHLHE23Q8NDY6 225 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 LILRB4Q8NHJ6 448 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 CPNE4Q96A23 557 aaPredicted RBP12.54□□□□□ -0.4
SCAF4-202ENST00000399804 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 GPR87Q9BY21 358 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 ARL6Q9H0F7 186 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 ZCCHC4Q9H5U6 513 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 KLK11Q9UBX7 282 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 PCDHGA1Q9Y5H4 931 aa12.54□□□□□ -0.4
SCAF4-202ENST00000399804 SNRNP200O75643 2136 aaKnown RBP12.53□□□□□ -0.4
SCAF4-202ENST00000399804 TMEM235A6NFC5 223 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 ITGB2P05107 769 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 FXYD4P59646 89 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 FOXK1P85037 733 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 CDC20Q12834 499 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 PLPPR5Q32ZL2 321 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 ZNF684Q5T5D7 378 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 CDC20BQ86Y33 519 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 LIX1LQ8IVB5 337 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 MKXQ8IYA7 352 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 SEMA6DQ8NFY4 1073 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 OR5L1Q8NGL2 311 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 LIPHQ8WWY8 451 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
SCAF4-202ENST00000399804 PPIL3Q9H2H8 161 aaKnown RBP12.53□□□□□ -0.4
SCAF4-202ENST00000399804 GOSR2O14653 212 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 DXOO77932 396 aaKnown RBP12.53□□□□□ -0.4
SCAF4-202ENST00000399804 INSM1Q01101 510 aaPredicted RBP12.53□□□□□ -0.4
SCAF4-202ENST00000399804 ZADH2Q8N4Q0 377 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 BOLLQ8N9W6 283 aaKnown RBP12.53□□□□□ -0.4
SCAF4-202ENST00000399804 OR9K2Q8NGE7 335 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 OR10K1Q8NGX5 313 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 DEDD2Q8WXF8 326 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 UCN2Q96RP3 112 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 GPR173Q9NS66 373 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 TPOP07202 933 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 KIR2DL3P43628 341 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 EGR4Q05215 589 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 FAAP20Q6NZ36 180 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 GALNT16Q8N428 558 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 TMEM105Q8N8V8 129 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 OR10AC1Q8NH08 325 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 SLC7A6Q92536 515 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 DPCDQ9BVM2 203 aaPredicted RBP12.53□□□□□ -0.4
SCAF4-202ENST00000399804 MIXL1Q9H2W2 232 aa12.53□□□□□ -0.4
SCAF4-202ENST00000399804 SLC17A2O00624 439 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 DVL2O14641 736 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 HOXA6P31267 233 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 DEGS2Q6QHC5 323 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 CFAP77Q6ZQR2 320 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 OR6X1Q8NH79 312 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 GPR27Q9NS67 375 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 PFDN2Q9UHV9 154 aa12.52□□□□□ -0.4
SCAF4-202ENST00000399804 IGHV1-45A0A0A0MS14 117 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms