RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PRAMEF6Q5VXH4 476 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF626Q68DY1 528 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 MDGA2Q7Z553 956 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 ABI3BPQ7Z7G0 1075 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 NKAIN3Q8N8D7 197 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 PINX1Q96BK5 328 aaKnown RBP12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 EXO1Q9UQ84 846 aaKnown RBP12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 TRBV5-4A0A0C4DH59 114 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 A0A0D9SG52 128 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF195O14628 629 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 OIP5O43482 229 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 CBR1P16152 277 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 SELENBP1Q13228 472 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 RGS7BPQ6MZT1 257 aaPredicted RBP12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 RFPL4BQ6ZWI9 263 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 DOK3Q7L591 496 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 NANPQ8TBE9 248 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 SLAMF6Q96DU3 332 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 SAXO2Q658L1 398 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 CELF2-AS1Q8N7Q2 184 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 PLEKHF2Q9H8W4 249 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 PATZ1Q9HBE1 687 aaKnown RBP12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 ZFP92A6NM28 416 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 SOD1P00441 154 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 PPP3CBP16298 524 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 HIST1H1CP16403 213 aaKnown RBP12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 ST8SIA4Q92187 359 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 ALG14Q96F25 216 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 C20orf85Q9H1P6 137 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 P4HTMQ9NXG6 502 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 SH2D1BO14796 132 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 FTH1P19P0C7X4 201 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 RBP2P50120 134 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 MEOX1P50221 254 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 SRPXP78539 464 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 RELAQ04206 551 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 PLA1AQ53H76 456 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 DMRTC1Q5HYR2 192 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 TMEM102Q8N9M5 508 aaPredicted RBP12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 RDH5Q92781 318 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 FBXW5Q969U6 566 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 FCRL1Q96LA6 429 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 ANKRD12Q6UB98 2062 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 TRIP12Q14669 1992 aaPredicted RBP12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 TMPRSS11DO60235 418 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 C19orf53Q9UNZ5 99 aaPredicted RBP12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 SLCO1B1Q9Y6L6 691 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 CELA2BP08218 269 aaPredicted RBP12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 ETV6P41212 452 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF83P51522 516 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 BHLHA9Q7RTU4 235 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 PTRH1Q86Y79 214 aaKnown RBP12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 OR6M1Q8NGM8 313 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 C16orf52Q8NHV5 167 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 APOBEC4Q8WW27 367 aaKnown RBP12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 MED29Q9NX70 200 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 SHISA8B8ZZ34 492 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 B4GALT1P15291 398 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 RPS16P62249 146 aaKnown RBP12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 ACKR1Q16570 336 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 BPIFCQ8NFQ6 507 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 ETV7Q9Y603 341 aa12.91□□□□□ -0.34
PCDHA11-201ENST00000398640 MEIKINA0A087WXM9 373 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 LOC107986453A0A1B0GWG9 222 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 ARNTP27540 789 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 WIPI1Q5MNZ9 446 aaPredicted RBP12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 THNSL2Q86YJ6 484 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 CARFQ8N187 725 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 PELI3Q8N2H9 469 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 SLC30A7Q8NEW0 376 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 SEC22CQ9BRL7 303 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 BCO1Q9HAY6 547 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 FBXL4Q9UKA2 621 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 PPIL1Q9Y3C6 166 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 TOX3O15405 576 aaPredicted RBP12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 MAGEB4O15481 346 aaPredicted RBP12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 PPIHO43447 177 aaKnown RBP12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 PAX6P26367 422 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 RPS27P42677 84 aaKnown RBP12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 REEP6Q96HR9 211 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 SLC23A1Q9UHI7 598 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 ASB1Q9Y576 335 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 HNF1AP20823 631 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 ID4P47928 161 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 CISD2Q8N5K1 135 aaKnown RBP12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 OR1L3Q8NH93 324 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 CT55Q8WUE5 264 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 C1QTNF3Q9BXJ4 246 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 EMDP50402 254 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF718Q3SXZ3 478 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 CXorf67Q86X51 503 aaPredicted RBP12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 TMEM99Q8N816 258 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 RHOXF1Q8NHV9 184 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 GPR119Q8TDV5 335 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 TEAD3Q99594 435 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 DUSP22Q9NRW4 184 aa12.9□□□□□ -0.34
PCDHA11-201ENST00000398640 UBL3O95164 117 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms