RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 SP140LQ9H930 580 aa16.06■□□□□ 0.16
COLCA2-201ENST00000398035 CHODLQ9H9P2 273 aa16.06■□□□□ 0.16
COLCA2-201ENST00000398035 ACSM4P0C7M7 580 aa16.05■□□□□ 0.16
COLCA2-201ENST00000398035 KLHL12Q53G59 568 aa16.05■□□□□ 0.16
COLCA2-201ENST00000398035 DRAM2Q6UX65 266 aa16.05■□□□□ 0.16
COLCA2-201ENST00000398035 CXXC5Q7LFL8 322 aaKnown RBP16.05■□□□□ 0.16
COLCA2-201ENST00000398035 ZNF454Q8N9F8 522 aa16.05■□□□□ 0.16
COLCA2-201ENST00000398035 HCAR1Q9BXC0 346 aa16.05■□□□□ 0.16
COLCA2-201ENST00000398035 TOR3AQ9H497 397 aa16.05■□□□□ 0.16
COLCA2-201ENST00000398035 MED20Q9H944 212 aa16.05■□□□□ 0.16
COLCA2-201ENST00000398035 H2AFY2Q9P0M6 372 aaPredicted RBP16.05■□□□□ 0.16
COLCA2-201ENST00000398035 PURGQ9UJV8 347 aaKnown RBP16.05■□□□□ 0.16
COLCA2-201ENST00000398035 OAZ3Q9UMX2 235 aa16.05■□□□□ 0.16
COLCA2-201ENST00000398035 ZNF878C9JN71 531 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 M0R135 149 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 TPD52L2O43399 206 aaKnown RBP16.04■□□□□ 0.16
COLCA2-201ENST00000398035 HPXP02790 462 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 LCATP04180 440 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 IGFBP5P24593 272 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 CRYBB2P43320 205 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 GRB2P62993 217 aaKnown RBP16.04■□□□□ 0.16
COLCA2-201ENST00000398035 CCL8P80075 99 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 RIN1Q13671 783 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 DPY19L4Q7Z388 723 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 ERI1Q8IV48 349 aaKnown RBP16.04■□□□□ 0.16
COLCA2-201ENST00000398035 SLAMF6Q96DU3 332 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 ZNF799Q96GE5 643 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 KCNJ15Q99712 375 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 COPS4Q9BT78 406 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 CENPMQ9NSP4 180 aa16.04■□□□□ 0.16
COLCA2-201ENST00000398035 A0A096LNT2 108 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 TNFSF4P23510 183 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 OTX1P32242 354 aaPredicted RBP16.03■□□□□ 0.16
COLCA2-201ENST00000398035 MAGEB1P43366 347 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 RIPPLY3P57055 190 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 RPS7P62081 194 aaKnown RBP16.03■□□□□ 0.16
COLCA2-201ENST00000398035 EIF2B1Q14232 305 aaKnown RBP16.03■□□□□ 0.16
COLCA2-201ENST00000398035 SLX4IPQ5VYV7 408 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 LYPD4Q6UWN0 246 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 TIGD4Q8IY51 512 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 OR6N2Q8NGY6 317 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 ST7LQ8TDW4 575 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 ZNF582Q96NG8 517 aaPredicted RBP16.03■□□□□ 0.16
COLCA2-201ENST00000398035 TEAD3Q99594 435 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 SAP30LQ9HAJ7 183 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 ORC6Q9Y5N6 252 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 ACANP16112 2415 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 VPS13CQ709C8 3753 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 MED13LQ71F56 2210 aa16.03■□□□□ 0.16
COLCA2-201ENST00000398035 ZAR1LA6NP61 321 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 SPRY3O43610 288 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 TLX2O43763 284 aaPredicted RBP16.02■□□□□ 0.16
COLCA2-201ENST00000398035 MITFO75030 526 aaPredicted RBP16.02■□□□□ 0.16
COLCA2-201ENST00000398035 CD55P08174 381 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 COL8A2P25067 703 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 RPS27P42677 84 aaKnown RBP16.02■□□□□ 0.16
COLCA2-201ENST00000398035 SLC6A9P48067 706 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 PPP2R2BQ00005 443 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 CDK5R2Q13319 367 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 LCN1P1Q5VSP4 162 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 MAPK1IP1LQ8NDC0 245 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 OR10S1Q8NGN2 331 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 RNF133Q8WVZ7 376 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 ELMOD3Q96FG2 381 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 CIB1Q99828 191 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 PKP2Q99959 881 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 BPESC1Q9GZL8 116 aa16.02■□□□□ 0.16
COLCA2-201ENST00000398035 FLNAP21333 2647 aaKnown RBP16.02■□□□□ 0.16
COLCA2-201ENST00000398035 TEP1Q99973 2627 aaKnown RBP16.02■□□□□ 0.16
COLCA2-201ENST00000398035 IGHV1-69-2A0A0G2JMI3 117 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 H3BNX3 289 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 IGHV1-46P01743 117 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 TNFRSF1AP19438 455 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 CHN2P52757 468 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 EFNB1P98172 346 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 SLC3A1Q07837 685 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 GGTLC2Q14390 218 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 TSTQ16762 297 aaKnown RBP16.02■□□□□ 0.15
COLCA2-201ENST00000398035 TMEM249Q2WGJ8 235 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 HFEQ30201 348 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.02■□□□□ 0.15
COLCA2-201ENST00000398035 OR8G5Q8NG78 346 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 OR13G1Q8NGZ3 307 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 OTOSQ8NHW6 89 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 ZMYND19Q96E35 227 aaPredicted RBP16.02■□□□□ 0.15
COLCA2-201ENST00000398035 ABHD6Q9BV23 337 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 PTTG3PQ9NZH4 202 aa16.02■□□□□ 0.15
COLCA2-201ENST00000398035 TMEFF2Q9UIK5 374 aaPredicted RBP16.02■□□□□ 0.15
COLCA2-201ENST00000398035 ZNF469Q96JG9 3925 aaPredicted RBP16.01■□□□□ 0.15
COLCA2-201ENST00000398035 MTORP42345 2549 aa16.01■□□□□ 0.15
COLCA2-201ENST00000398035 SAC3D1A6NKF1 404 aa16.01■□□□□ 0.15
COLCA2-201ENST00000398035 RRP9O43818 475 aaKnown RBP16.01■□□□□ 0.15
COLCA2-201ENST00000398035 CD5LO43866 347 aa16.01■□□□□ 0.15
COLCA2-201ENST00000398035 TACSTD2P09758 323 aa16.01■□□□□ 0.15
COLCA2-201ENST00000398035 SLC2A5P22732 501 aa16.01■□□□□ 0.15
COLCA2-201ENST00000398035 HSD11B1P28845 292 aa16.01■□□□□ 0.15
COLCA2-201ENST00000398035 GPR6P46095 362 aaPredicted RBP16.01■□□□□ 0.15
COLCA2-201ENST00000398035 RAD23AP54725 363 aa16.01■□□□□ 0.15
COLCA2-201ENST00000398035 APOFQ13790 326 aa16.01■□□□□ 0.15
COLCA2-201ENST00000398035 NXNL2Q5VZ03 156 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms