RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 TMEM54Q969K7 222 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 INTS12Q96CB8 462 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 WDR76Q9H967 626 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF175Q9Y473 711 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 DNAJC13O75165 2243 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 CACNA1GO43497 2377 aa17.07■□□□□ 0.32
PDLIM2-204ENST00000397760 ARPC4-TTLL3A0A0A6YYG9 625 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 A0A0A6YYJ9 748 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 TCRBP04435 133 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 EDNRAP25101 427 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 STOMP27105 288 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 PTGS2P35354 604 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 C6orf183Q5T699 404 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 LRFN4Q6PJG9 635 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 SLC25A47Q6Q0C1 308 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF782Q6ZMW2 699 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 KRT74Q7RTS7 529 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 TUSC5Q8IXB3 177 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 CISD2Q8N5K1 135 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 OR5H6Q8NGV6 325 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 SMIM4Q8WVI0 70 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 INTS14Q96SY0 518 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 SLX1AQ9BQ83 275 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 RANBP3Q9H6Z4 567 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 BRD7Q9NPI1 651 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 GNG8Q9UK08 70 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 CLEC4AQ9UMR7 237 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 ING4Q9UNL4 249 aa17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 NOSIPQ9Y314 301 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-204ENST00000397760 TGM6O95932 706 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 TACSTD2P09758 323 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 GNG2P59768 71 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 KRTCAP3Q53RY4 240 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 PHYHD1Q5SRE7 291 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF324BQ6AW86 544 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 UTS2BQ765I0 119 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 ADGRE4PQ86SQ3 457 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 C20orf196Q8IYI0 205 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 DEDD2Q8WXF8 326 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 TMEM45BQ96B21 275 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 MNTQ99583 582 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 BCO1Q9HAY6 547 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 PLEKHA1Q9HB21 404 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 MRPL22Q9NWU5 206 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 FOXD3Q9UJU5 478 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF281Q9Y2X9 895 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF724A8MTY0 619 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 SULT1B1O43704 296 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 MPZL1O95297 269 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 SRMP19623 302 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF684Q5T5D7 378 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 OTPQ5XKR4 325 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 FGD2Q7Z6J4 655 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 GLB1L2Q8IW92 636 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 RFLNBQ8N5W9 214 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 OR13C5Q8NGS8 318 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 OR6N2Q8NGY6 317 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 TRIB1Q96RU8 372 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 RNF122Q9H9V4 155 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 CALHM2Q9HA72 323 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 DIABLOQ9NR28 239 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 COPS3Q9UNS2 423 aa17.05■□□□□ 0.32
PDLIM2-204ENST00000397760 AIPO00170 330 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 FCGR2AP12318 317 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 SNRPBP14678 240 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 MEP1BQ16820 701 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 BTN2A1Q7KYR7 527 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 P4HA3Q7Z4N8 544 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 CDC20BQ86Y33 519 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 SLC26A10Q8NG04 563 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 C15orf40Q8WUR7 153 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 CACNG6Q9BXT2 260 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 NUDT15Q9NV35 164 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 CLCF1Q9UBD9 225 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 KIAA1549Q9HCM3 1950 aa17.04■□□□□ 0.32
PDLIM2-204ENST00000397760 A0A1W2PPL8 197 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 NAP1L6A6NFF2 107 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 HSPB2A8KAH6 182 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 AHRRA9YTQ3 701 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF593O00488 134 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 MRPL33O75394 65 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 ECDO95905 644 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 MAPK3P27361 379 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 LAP3P28838 519 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 RPS27P42677 84 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 ADAM8P78325 824 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 MRPS10P82664 201 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 GALK2Q01415 458 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 KLF9Q13886 244 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 HSPB2Q16082 182 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 BCL2L15Q5TBC7 163 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 LAMTOR1Q6IAA8 161 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 DPY19L4Q7Z388 723 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 ZNF671Q8TAW3 534 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 OR14A2Q96R54 314 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 TTTY10Q9BZA0 68 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 ULBP2Q9BZM5 246 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 PARPBPQ9NWS1 579 aa17.03■□□□□ 0.32
PDLIM2-204ENST00000397760 A0A1B0GVI7 797 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms