RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CCNKO75909 580 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 GLSO94925 669 aaPredicted RBP7.36□□□□□ -1.23
PTPRD-204ENST00000397606 NXPH2O95156 264 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 NRASP01111 189 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 ALOX5APP20292 161 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF441Q8N8Z8 693 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 OR1J1Q8NGS3 322 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 CAPSLQ8WWF8 208 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 DCLRE1CQ96SD1 692 aaKnown RBP7.36□□□□□ -1.23
PTPRD-204ENST00000397606 JAM3Q9BX67 310 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 AMDHD2Q9Y303 409 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 RHBDD3Q9Y3P4 386 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 OBSL1O75147 1896 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 PIGBOS1A0A0B4J2F0 54 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 MCRIP1C9JLW8 97 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 NCR1O76036 304 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 CSF1P09603 554 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 SNRPBP14678 240 aaKnown RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 CAV3P56539 151 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 METAP1DQ6UB28 335 aaPredicted RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 SSX8Q7RTT4 187 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 NUFIP2Q7Z417 695 aaKnown RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ANGPTL5Q86XS5 388 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 RDH10Q8IZV5 341 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 SLC30A7Q8NEW0 376 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 PP6455Q8WZ26 134 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 PTP4A1Q93096 173 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 WNT2BQ93097 391 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 FAM3DQ96BQ1 224 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 GPR173Q9NS66 373 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 TAS2R4Q9NYW5 299 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 PTTG3PQ9NZH4 202 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 OR14J1Q9UGF5 321 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 KIF26AQ9ULI4 1882 aaPredicted RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 FUOMA2VDF0 154 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 NOS1APO75052 506 aaPredicted RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 CST2P09228 141 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 LIMS3P0CW19 117 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 LIMS4P0CW20 117 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 STOMP27105 288 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 OPRL1P41146 370 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 FABP6P51161 128 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 CLDN12P56749 244 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF385CQ66K41 422 aaPredicted RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 OLFML2AQ68BL7 652 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF774Q6NX45 483 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF517Q6ZMY9 492 aaPredicted RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 FAM214BQ7L5A3 538 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ADGRE4PQ86SQ3 457 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 EGFL6Q8IUX8 553 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 SPACA3Q8IXA5 215 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 PRR7Q8TB68 274 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 RAB39BQ96DA2 213 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF385AQ96PM9 386 aaKnown RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF703Q9H7S9 590 aaPredicted RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 GPR35Q9HC97 309 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 TAS2R5Q9NYW4 299 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 COPZ2Q9P299 210 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 RAB22AQ9UL26 194 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 A3GALT2U3KPV4 340 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF816-ZNF321PA0A0X1KG74 233 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 LOC100289279A0A1B0GTE1 492 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 OR14I1A6ND48 311 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ZIC2O95409 532 aaPredicted RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 SLC34A2O95436 690 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 TXNDC12O95881 172 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ONECUT2O95948 504 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 HLA-DOBP13765 273 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 TNFSF8P32971 234 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 GABRA2P47869 451 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 CCR9P51686 369 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 MRPS34P82930 218 aaKnown RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 IKZF1Q13422 519 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 PCGF3Q3KNV8 242 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 CLVS2Q5SYC1 327 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 PIP4P1Q86T03 277 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF573Q86YE8 665 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 OR6Q1Q8NGQ2 317 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 LGALS14Q8TCE9 139 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 PELI1Q96FA3 418 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ABHD17AQ96GS6 310 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 CCDC120Q96HB5 630 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 TECTBQ96PL2 329 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 DOK1Q99704 481 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 SELENOIQ9C0D9 397 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ACKR4Q9NPB9 350 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 KCNS2Q9ULS6 477 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 PTPRSQ13332 1948 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 CCL21O00585 134 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 CTDSP2O14595 271 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 EPPINO95925 133 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 RLN2P04090 185 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 GRPP07492 148 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 KIR2DL3P43628 341 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF83P51522 516 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ETFDHQ16134 617 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 GLIPR1L1Q6UWM5 242 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ASCC1Q8N9N2 400 aaKnown RBP7.35□□□□□ -1.23
PTPRD-204ENST00000397606 ACBD4Q8NC06 268 aa7.35□□□□□ -1.23
PTPRD-204ENST00000397606 OR51D1Q8NGF3 324 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms