RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 KCNJ15Q99712 375 aa18.47■□□□□ 0.55
CPNE1-204ENST00000397443 SRSF10O75494 262 aaKnown RBP18.46■□□□□ 0.55
CPNE1-204ENST00000397443 GABRA5P31644 462 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 ARR3P36575 388 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 VBP1P61758 197 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 FAM57BQ71RH2 274 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 RHOUQ7L0Q8 258 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 ZNF676Q8N7Q3 588 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 OR5AK2Q8NH90 309 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 SPTSSAQ969W0 71 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 TRMT61AQ96FX7 289 aaKnown RBP18.46■□□□□ 0.55
CPNE1-204ENST00000397443 SLC17A5Q9NRA2 495 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 FAM206AQ9NX38 181 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 B3GNT2Q9NY97 397 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 NDUFA13Q9P0J0 144 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 RSL24D1Q9UHA3 163 aaKnown RBP18.46■□□□□ 0.55
CPNE1-204ENST00000397443 OR52A1Q9UKL2 312 aa18.46■□□□□ 0.55
CPNE1-204ENST00000397443 SF3B6Q9Y3B4 125 aaKnown RBP18.46■□□□□ 0.55
CPNE1-204ENST00000397443 OR6C6A6NF89 314 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 M0R135 149 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 GPX5O75715 221 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 PSMA6P60900 246 aaKnown RBP18.45■□□□□ 0.54
CPNE1-204ENST00000397443 ADORA2A-AS1P86434 159 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 FABP5Q01469 135 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 MRPL28Q13084 256 aaKnown RBP18.45■□□□□ 0.54
CPNE1-204ENST00000397443 GFOD2Q3B7J2 385 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 BCL2L15Q5TBC7 163 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 CATSPERDQ86XM0 798 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 S100PBPQ96BU1 408 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 ZNF799Q96GE5 643 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 CCDC120Q96HB5 630 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 DOK1Q99704 481 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 G6PC2Q9NQR9 355 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 FAM90A27PA6NNH2 459 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 CRYBB2P43320 205 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 MAGEB1P43366 347 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 PLP2Q04941 152 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 GPR50Q13585 617 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 EGFL6Q8IUX8 553 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 GALNT11Q8NCW6 608 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 C1orf162Q8NEQ5 155 aaPredicted RBP18.45■□□□□ 0.54
CPNE1-204ENST00000397443 IL17RDQ8NFM7 739 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 C12orf43Q96C57 262 aaKnown RBP18.45■□□□□ 0.54
CPNE1-204ENST00000397443 DGCR14Q96DF8 476 aaKnown RBP18.45■□□□□ 0.54
CPNE1-204ENST00000397443 CENPOQ9BU64 300 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 FAM192AQ9GZU8 254 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 PBOV1Q9GZY1 135 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 NIPAL2Q9H841 368 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 STUB1Q9UNE7 303 aa18.45■□□□□ 0.54
CPNE1-204ENST00000397443 C5orf49A4QMS7 147 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 OR4C45A6NMZ5 311 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 H3BMQ9 156 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 CELA3BP08861 270 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 CRYGSP22914 178 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 MMP16P51512 607 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 NCS1P62166 190 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 HGFACQ04756 655 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 CTF1Q16619 201 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 ZNF584Q8IVC4 421 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 WDR31Q8NA23 367 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 OR10AC1Q8NH08 325 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 HAVCR2Q8TDQ0 301 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 WACQ9BTA9 647 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 COMMD4Q9H0A8 199 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 COQ3Q9NZJ6 369 aa18.44■□□□□ 0.54
CPNE1-204ENST00000397443 LOC100509620A0A075B734 347 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 IQCMA0A1B0GVH7 501 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 C5orf63A6NC05 138 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 B8ZZF3 427 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 GABARAPO95166 117 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 STOMP27105 288 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 IDH3GP51553 393 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-204ENST00000397443 TMBIM6P55061 237 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 ECH1Q13011 328 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 C22orf42Q6IC83 251 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 ZNF544Q6NX49 715 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 MYPOPQ86VE0 399 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-204ENST00000397443 RAB2BQ8WUD1 216 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 COQ7Q99807 217 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 ACTR6Q9GZN1 396 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 SLC24A3Q9HC58 644 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 SSR3Q9UNL2 185 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 ZNF462Q96JM2 2506 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 A0A1W2PPK0 400 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 OR5H1A6NKK0 313 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 TBX1O43435 398 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 DCTDP32321 178 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 TPTEP56180 551 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 FDX2Q6P4F2 183 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 ZNF843Q8N446 348 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 OR51A4Q8NGJ6 313 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 RGP1Q92546 391 aaPredicted RBP18.43■□□□□ 0.54
CPNE1-204ENST00000397443 PGAM5Q96HS1 289 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 JKAMPQ9P055 326 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 ZNF281Q9Y2X9 895 aa18.43■□□□□ 0.54
CPNE1-204ENST00000397443 TMEM212A6NML5 194 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 P2RY10O00398 339 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 GABRPO00591 440 aa18.42■□□□□ 0.54
CPNE1-204ENST00000397443 PSMB1P20618 241 aaKnown RBP18.42■□□□□ 0.54
CPNE1-204ENST00000397443 CHRNB4P30926 498 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms