RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CLEC12AQ5QGZ9 265 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 OR1F12Q8NHA8 337 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 APOBEC3DQ96AK3 386 aaPredicted RBP12.35□□□□□ -0.43
SEC13-206ENST00000397102 ZNRD1Q9P1U0 126 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 SH3GLB1Q9Y371 365 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 FAM96BQ9Y3D0 163 aa12.35□□□□□ -0.43
SEC13-206ENST00000397102 ELOVL7A1L3X0 281 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 HTR3EA5X5Y0 456 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 H7C1C5 153 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 FBP2O00757 339 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 HLA-DPB1P04440 258 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 DBHP09172 617 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 CD200P41217 278 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 LCN6P62502 163 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 PIN1Q13526 163 aaPredicted RBP12.34□□□□□ -0.43
SEC13-206ENST00000397102 AGKQ53H12 422 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 CCDC92Q53HC0 331 aaPredicted RBP12.34□□□□□ -0.43
SEC13-206ENST00000397102 VAX1Q5SQQ9 334 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 DHDDSQ86SQ9 333 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 BPIFA2Q96DR5 249 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 KAT8Q9H7Z6 458 aaKnown RBP12.34□□□□□ -0.43
SEC13-206ENST00000397102 SMURF1Q9HCE7 757 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 FBLN5Q9UBX5 448 aa12.34□□□□□ -0.43
SEC13-206ENST00000397102 CAB39Q9Y376 341 aaPredicted RBP12.34□□□□□ -0.43
SEC13-206ENST00000397102 LGALS8O00214 317 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 ADAM20O43506 726 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 FBP1P09467 338 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 IFI30P13284 250 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 TNFRSF1BP20333 461 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 LSM6P62312 80 aaKnown RBP12.33□□□□□ -0.44
SEC13-206ENST00000397102 ARF6P62330 175 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 C11orf91Q3C1V1 193 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 WDR93Q6P2C0 686 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 CCDC80Q76M96 950 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 PDZD9Q8IXQ8 264 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 CGREF1Q99674 301 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 ECSITQ9BQ95 431 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 TRIM36Q9NQ86 728 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 NECAP2Q9NVZ3 263 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 RNF7Q9UBF6 113 aa12.33□□□□□ -0.44
SEC13-206ENST00000397102 TRAV27A0A087WT01 109 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 TEX13CA0A0J9YWL9 993 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 NDUFA2O43678 99 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 AHCYL1O43865 530 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 SHOX2O60902 331 aaPredicted RBP12.32□□□□□ -0.44
SEC13-206ENST00000397102 ECDO95905 644 aaPredicted RBP12.32□□□□□ -0.44
SEC13-206ENST00000397102 SLC18A1P54219 525 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 HOXA4Q00056 320 aaPredicted RBP12.32□□□□□ -0.44
SEC13-206ENST00000397102 FHL1Q13642 323 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 MPPED2Q15777 294 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 VMACQ2NL98 169 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 ANKDD1AQ495B1 522 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 PRAMEF6Q5VXH4 476 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 SFRP4Q6FHJ7 346 aaPredicted RBP12.32□□□□□ -0.44
SEC13-206ENST00000397102 SLC35E4Q6ICL7 350 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 VMO1Q7Z5L0 202 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 CROCCP2Q86T23 111 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 OR51A7Q8NH64 312 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 NPRL2Q8WTW4 380 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 ZNF583Q96ND8 569 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 EBF4Q9BQW3 602 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 CCDC28BQ9BUN5 200 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 HCAR1Q9BXC0 346 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 UFSP2Q9NUQ7 469 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 AURKAIP1Q9NWT8 199 aaPredicted RBP12.32□□□□□ -0.44
SEC13-206ENST00000397102 BAG5Q9UL15 447 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 KPTNQ9Y664 436 aa12.32□□□□□ -0.44
SEC13-206ENST00000397102 TRAV38-1A0A0B4J264 116 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 A0A1B0GVI7 797 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 ANKRD61A6NGH8 418 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 RER1O15258 196 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 CTLA4P16410 223 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 GABRA5P31644 462 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 IDH3AP50213 366 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 ST3GAL3Q11203 375 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 CDONQ4KMG0 1287 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 OXLD1Q5BKU9 147 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 BEND6Q5SZJ8 279 aaPredicted RBP12.31□□□□□ -0.44
SEC13-206ENST00000397102 C11orf88Q6PI97 169 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 METAP1DQ6UB28 335 aaPredicted RBP12.31□□□□□ -0.44
SEC13-206ENST00000397102 BTN2A1Q7KYR7 527 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 MICU2Q8IYU8 434 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 DPP10Q8N608 796 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 OR10A6Q8NH74 314 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 OR5R1Q8NH85 324 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 CFHR4Q92496 578 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 ZBTB9Q96C00 473 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 SEMA6AQ9H2E6 1030 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 RASSF4Q9H2L5 321 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 WDR76Q9H967 626 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 FN3KRPQ9HA64 309 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 GRHPRQ9UBQ7 328 aa12.31□□□□□ -0.44
SEC13-206ENST00000397102 PRSS37A4D1T9 235 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 OOEPA6NGQ2 149 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 RNASEK-C17orf49H0YIS7 233 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 XKRYO14609 159 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 XPNPEP2O43895 674 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 OR10H3O60404 316 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 FCN3O75636 299 aa12.3□□□□□ -0.44
SEC13-206ENST00000397102 GZMMP51124 257 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms