RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ZSCAN26Q16670 478 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 RFX4Q33E94 735 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 AWAT1Q58HT5 328 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 ZNF770Q6IQ21 691 aaPredicted RBP13.77□□□□□ -0.21
CLTA-203ENST00000396603 RBMS3Q6XE24 437 aaKnown RBP13.77□□□□□ -0.21
CLTA-203ENST00000396603 ZNF620Q6ZNG0 422 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 RASSF6Q6ZTQ3 369 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 IGFN1Q86VF2 1251 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 KLHL36Q8N4N3 616 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 CLDN22Q8N7P3 220 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 SLCO4A1Q96BD0 722 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 OR52D1Q9H346 318 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 NRIP3Q9NQ35 241 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 IL19Q9UHD0 177 aa13.77□□□□□ -0.21
CLTA-203ENST00000396603 PURGQ9UJV8 347 aaKnown RBP13.77□□□□□ -0.21
CLTA-203ENST00000396603 IMPA2O14732 288 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 TIPRLO75663 272 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 ABHD16AO95870 558 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 GASTP01350 101 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 PPIAL4GP0DN37 164 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 NOS3P29474 1203 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 ENDOGQ14249 297 aaKnown RBP13.76□□□□□ -0.21
CLTA-203ENST00000396603 KPNB1Q14974 876 aaKnown RBP13.76□□□□□ -0.21
CLTA-203ENST00000396603 CD300LDQ6UXZ3 194 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 DOK3Q7L591 496 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 DEFB108BQ8NET1 73 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 ZNF747Q9BV97 191 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 PATZ1Q9HBE1 687 aaKnown RBP13.76□□□□□ -0.21
CLTA-203ENST00000396603 ESM1Q9NQ30 184 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 POLE4Q9NR33 117 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 TMEM106BQ9NUM4 274 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 VNN3Q9NY84 501 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 PDP1Q9P0J1 537 aaPredicted RBP13.76□□□□□ -0.21
CLTA-203ENST00000396603 KIF17Q9P2E2 1029 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 ATPIF1Q9UII2 106 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 TANC2Q9HCD6 1990 aa13.76□□□□□ -0.21
CLTA-203ENST00000396603 ARPC3O15145 178 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 TIMM8AO60220 97 aaPredicted RBP13.75□□□□□ -0.21
CLTA-203ENST00000396603 RGS9O75916 674 aaPredicted RBP13.75□□□□□ -0.21
CLTA-203ENST00000396603 FSTL3O95633 263 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 TXNDC12O95881 172 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 NGFP01138 241 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 HKR1P10072 659 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 LCN2P80188 198 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 PPP1R8Q12972 351 aaKnown RBP13.75□□□□□ -0.21
CLTA-203ENST00000396603 PSG7Q13046 419 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 KRR1Q13601 381 aaKnown RBP13.75□□□□□ -0.21
CLTA-203ENST00000396603 PRR31Q5SQ13 230 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 ZNF774Q6NX45 483 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 SHISA2Q6UWI4 295 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 FAM122BQ7Z309 247 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 LRRC28Q86X40 367 aaPredicted RBP13.75□□□□□ -0.21
CLTA-203ENST00000396603 MUC20Q8N307 709 aaPredicted RBP13.75□□□□□ -0.21
CLTA-203ENST00000396603 ATG16L2Q8NAA4 619 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 OR5K1Q8NHB7 308 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 FEVQ99581 238 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 IFT27Q9BW83 186 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 ZNF696Q9H7X3 374 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 MSL2Q9HCI7 577 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 PLEK2Q9NYT0 353 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 UBAP1Q9NZ09 502 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 NUP50Q9UKX7 468 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 BAIAP2Q9UQB8 552 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 IER3IP1Q9Y5U9 82 aa13.75□□□□□ -0.21
CLTA-203ENST00000396603 TEX13CA0A0J9YWL9 993 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 A0A1W2PPL8 197 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 PRSS37A4D1T9 235 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 F5H0A9 414 aaPredicted RBP13.74□□□□□ -0.21
CLTA-203ENST00000396603 ZNF12P17014 697 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 PRTN3P24158 256 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 SLC6A9P48067 706 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 RGS6P49758 472 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 BTG1P62324 171 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 ZNF154Q13106 437 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 AQP6Q13520 282 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 ARMCX4Q5H9R4 360 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 DNM1P34Q6PK57 102 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 JAZF1Q86VZ6 243 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 ZDHHC13Q8IUH4 622 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 TEX47Q8TBZ9 253 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 CENPNQ96H22 339 aaPredicted RBP13.74□□□□□ -0.21
CLTA-203ENST00000396603 Q96M85 177 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 ERMAPQ96PL5 475 aaPredicted RBP13.74□□□□□ -0.21
CLTA-203ENST00000396603 DCLRE1CQ96SD1 692 aaKnown RBP13.74□□□□□ -0.21
CLTA-203ENST00000396603 OSBPL10Q9BXB5 764 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 TEX12Q9BXU0 123 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 TBC1D23Q9NUY8 699 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 IL20Q9NYY1 176 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 IL20RAQ9UHF4 553 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 ENOPH1Q9UHY7 261 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 ADAM18Q9Y3Q7 739 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 INSIG2Q9Y5U4 225 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 AUP1Q9Y679 476 aa13.74□□□□□ -0.21
CLTA-203ENST00000396603 G3V2T6 193 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 CLDN34H7C241 214 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 PPP1R3DO95685 299 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 RENP00797 406 aa13.73□□□□□ -0.21
CLTA-203ENST00000396603 ZNF26P17031 533 aaPredicted RBP13.73□□□□□ -0.21
CLTA-203ENST00000396603 ZFP36P26651 326 aaKnown RBP13.73□□□□□ -0.21
CLTA-203ENST00000396603 LSM6P62312 80 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms