RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 BMXP51813 675 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 C1orf185Q5T7R7 199 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 VWA1Q6PCB0 445 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 RPRMLQ8N4K4 120 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 ORAI1Q96D31 301 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF75AQ96N20 296 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 HDHD2Q9H0R4 259 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 NOX3Q9HBY0 568 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 B3GNT2Q9NY97 397 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 GTF3C1Q12789 2109 aa11.11□□□□□ -0.63
TRIM39-204ENST00000396548 A0A1W2PPK0 400 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 CASKO14936 926 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 SGCEO43556 437 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 UBCP0CG48 685 aaKnown RBP11.1□□□□□ -0.63
TRIM39-204ENST00000396548 CD37P11049 281 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 IGFBP3P17936 291 aaPredicted RBP11.1□□□□□ -0.63
TRIM39-204ENST00000396548 ACHEP22303 614 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 OR10A3P58181 314 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 PCBD1P61457 104 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 BCL2L15Q5TBC7 163 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 SLC16A14Q7RTX9 510 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 NAXEQ8NCW5 288 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 CPEB3Q8NE35 698 aaKnown RBP11.1□□□□□ -0.63
TRIM39-204ENST00000396548 OR8B12Q8NGG6 310 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 OR1F12Q8NHA8 337 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 STARD4Q96DR4 205 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 TPK1Q9H3S4 243 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 ARL6IP5O75915 188 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 OCM2P0CE71 109 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 IGHV1-2P23083 117 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 HSD11B1P28845 292 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 CEACAM8P31997 349 aaPredicted RBP11.1□□□□□ -0.63
TRIM39-204ENST00000396548 TIMP3P35625 211 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 ETV6P41212 452 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 SCRN3Q0VDG4 424 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 SF3B4Q15427 424 aaKnown RBP eCLIP11.1□□□□□ -0.63
TRIM39-204ENST00000396548 ODF4Q2M2E3 257 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 ANKRD16Q6P6B7 361 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF704Q6ZNC4 412 aaPredicted RBP11.1□□□□□ -0.63
TRIM39-204ENST00000396548 ABHD12BQ7Z5M8 362 aaPredicted RBP11.1□□□□□ -0.63
TRIM39-204ENST00000396548 CD163Q86VB7 1156 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 ATPIF1Q9UII2 106 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 SMIM30A4D0T7 59 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 DBHP09172 617 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 COX5AP20674 150 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 MAPK3P27361 379 aaPredicted RBP11.1□□□□□ -0.63
TRIM39-204ENST00000396548 ECH1Q13011 328 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 HSD17B12Q53GQ0 312 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 ZNF544Q6NX49 715 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 Q6ZT83 130 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 PLPP7Q8NBV4 271 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 SLC7A6Q92536 515 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 LYZL4Q96KX0 146 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 KCNS3Q9BQ31 491 aa11.1□□□□□ -0.63
TRIM39-204ENST00000396548 TRAV8-7A0A075B6U6 113 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 LOC107986453A0A1B0GWG9 222 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 ANKRD61A6NGH8 418 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 DOK2O60496 412 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 LMX1BO60663 402 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 CRHP06850 196 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 HOXD4P09016 255 aaPredicted RBP11.09□□□□□ -0.63
TRIM39-204ENST00000396548 BMP4P12644 408 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 ADRA2CP18825 462 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 C9orf135Q5VTT2 229 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 TMEM244Q5VVB8 128 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 BTLAQ7Z6A9 289 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 DOLPP1Q86YN1 238 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 UBE2J2Q8N2K1 259 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 AKR7LQ8NHP1 331 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 MIXL1Q9H2W2 232 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 SMURF1Q9HCE7 757 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 ASF1BQ9NVP2 202 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 PLEK2Q9NYT0 353 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 NCOR2Q9Y618 2525 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 A0A096LPE4 126 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 A0A1W2PPZ6 126 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 P2RY10O00398 339 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 CTDSP2O14595 271 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 FSTP19883 344 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 CFPP27918 469 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 PRKXP51817 358 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 PCSK4Q6UW60 755 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 GABRG1Q8N1C3 465 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 TMEM106AQ96A25 262 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 WDFY2Q96P53 400 aa11.09□□□□□ -0.63
TRIM39-204ENST00000396548 TTLL8A6PVC2 850 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 MYL9P24844 172 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 TAF13Q15543 124 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 SLC25A35Q3KQZ1 300 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF529Q6P280 563 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 STAC2Q6ZMT1 411 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 CCDC190Q86UF4 302 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 ZNF584Q8IVC4 421 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 HHLA2Q9UM44 414 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 PIEZO2Q9H5I5 2752 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 CACNA1CQ13936 2221 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 A0A0U1RQV5 110 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 FARS2O95363 451 aaKnown RBP11.08□□□□□ -0.64
TRIM39-204ENST00000396548 TPOP07202 933 aa11.08□□□□□ -0.64
TRIM39-204ENST00000396548 COX5BP10606 129 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms