RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CDRT15Q96T59 188 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 IFT27Q9BW83 186 aa15.15■□□□□ 0.02
CXCL12-204ENST00000395793 PNRC2Q9NPJ4 139 aaKnown RBP15.15■□□□□ 0.02
CXCL12-204ENST00000395793 MRPL22Q9NWU5 206 aaKnown RBP15.15■□□□□ 0.02
CXCL12-204ENST00000395793 POLR3KQ9Y2Y1 108 aaPredicted RBP15.15■□□□□ 0.02
CXCL12-204ENST00000395793 IQCF6A8MYZ5 107 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 ZNF205O95201 554 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 CYB5R3P00387 301 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-204ENST00000395793 RENP00797 406 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 FABP3P05413 133 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 ACSM4P0C7M7 580 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 SELEP16581 610 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 ZNF12P17014 697 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 GGT2P36268 569 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 GYS2P54840 703 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 SMIM11AP58511 58 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 KLF17Q5JT82 389 aaPredicted RBP15.14■□□□□ 0.01
CXCL12-204ENST00000395793 SAMD4BQ5PRF9 694 aaKnown RBP15.14■□□□□ 0.01
CXCL12-204ENST00000395793 PGBD2Q6P3X8 592 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 NAA40Q86UY6 237 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 BHLHE23Q8NDY6 225 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 FAM216AQ8WUB2 273 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 SLC30A2Q9BRI3 323 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 NSRP1Q9H0G5 558 aaKnown RBP15.14■□□□□ 0.01
CXCL12-204ENST00000395793 IL1RAPQ9NPH3 570 aa15.14■□□□□ 0.01
CXCL12-204ENST00000395793 DOCK11Q5JSL3 2073 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 A0A1B0GWJ7 208 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 CEACAM18A8MTB9 384 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 F5H5P2 479 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 SURF4O15260 269 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 ATP8B1O43520 1251 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 PSKH1P11801 424 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 MDH2P40926 338 aaKnown RBP15.13■□□□□ 0.01
CXCL12-204ENST00000395793 PMELP40967 661 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 ACTG1P63261 375 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 SLC35F1Q5T1Q4 408 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 ZDHHC21Q8IVQ6 265 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 KLHL36Q8N4N3 616 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 OR9Q2Q8NGE9 314 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 OR5L1Q8NGL2 311 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 OR10S1Q8NGN2 331 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 ZNRF4Q8WWF5 429 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 MAP6Q96JE9 813 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 DDOQ99489 341 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 SUCNR1Q9BXA5 334 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 C1QTNF5Q9BXJ0 243 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 EGLN3Q9H6Z9 239 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 CYB5R1Q9UHQ9 305 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 TAGLN3Q9UI15 199 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 INSIG2Q9Y5U4 225 aa15.13■□□□□ 0.01
CXCL12-204ENST00000395793 TMEM89A2RUT3 159 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 TRIM77I1YAP6 450 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 ATP6V1B2P21281 511 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 PYCR1P32322 319 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 COMPP49747 757 aaPredicted RBP15.12■□□□□ 0.01
CXCL12-204ENST00000395793 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.12■□□□□ 0.01
CXCL12-204ENST00000395793 TSPAN31Q12999 210 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 ZNF154Q13106 437 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 FAM201AQ5SY85 155 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 LYPD4Q6UWN0 246 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 CPLX4Q7Z7G2 160 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 DEFB107AQ8IZN7 70 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 BPIFB2Q8N4F0 458 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 OR52E2Q8NGJ4 325 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 OR8D4Q8NGM9 314 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 OR13G1Q8NGZ3 307 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 GNPDA2Q8TDQ7 276 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 MCUR1Q96AQ8 359 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 PITX2Q99697 317 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 BTBD10Q9BSF8 475 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 PLA2G12AQ9BZM1 189 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 TMEM165Q9HC07 324 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 LYVE1Q9Y5Y7 322 aa15.12■□□□□ 0.01
CXCL12-204ENST00000395793 C5orf63A6NC05 138 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 F5H5K5 113 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 BHLHE40O14503 412 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 HLA-DPB1P04440 258 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 WNT2P09544 360 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 RPS27P42677 84 aaKnown RBP15.11■□□□□ 0.01
CXCL12-204ENST00000395793 PAX2Q02962 417 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 TRAP1Q12931 704 aaKnown RBP15.11■□□□□ 0.01
CXCL12-204ENST00000395793 GK2Q14410 553 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-204ENST00000395793 CLEC12AQ5QGZ9 265 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 PIGWQ7Z7B1 504 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 MOGAT3Q86VF5 341 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 BCL6BQ8N143 479 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-204ENST00000395793 CYB561A3Q8NBI2 242 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 POP5Q969H6 163 aaKnown RBP15.11■□□□□ 0.01
CXCL12-204ENST00000395793 ZNF582Q96NG8 517 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-204ENST00000395793 ATF6BQ99941 703 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 RBM4Q9BWF3 364 aaKnown RBP15.11■□□□□ 0.01
CXCL12-204ENST00000395793 ZNF69Q9UC07 566 aa15.11■□□□□ 0.01
CXCL12-204ENST00000395793 IDH3BO43837 385 aa15.1■□□□□ 0.01
CXCL12-204ENST00000395793 NOS3P29474 1203 aa15.1■□□□□ 0.01
CXCL12-204ENST00000395793 SRP9P49458 86 aaKnown RBP15.1■□□□□ 0.01
CXCL12-204ENST00000395793 UBA52P62987 128 aaKnown RBP15.1■□□□□ 0.01
CXCL12-204ENST00000395793 GNGT1P63211 74 aa15.1■□□□□ 0.01
CXCL12-204ENST00000395793 HOXA4Q00056 320 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-204ENST00000395793 MAB21L1Q13394 359 aa15.1■□□□□ 0.01
CXCL12-204ENST00000395793 SLC36A3Q495N2 470 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms