RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 RNF121Q9H920 327 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 NUFIP1Q9UHK0 495 aaKnown RBP13.17□□□□□ -0.3
PTPN20-206ENST00000395722 OR52A1Q9UKL2 312 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 CFAP46Q8IYW2 2715 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 ZFYVE26Q68DK2 2539 aa13.17□□□□□ -0.3
PTPN20-206ENST00000395722 TMEM212A6NML5 194 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 APOC1P02654 83 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 CD79AP11912 226 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 HTR5AP47898 357 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 CX3CR1P49238 355 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 PRKXP51817 358 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 TUBA1BP68363 451 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 FABP5Q01469 135 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 GSG1Q2KHT4 349 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 C1QTNF12Q5T7M4 302 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 ZNF544Q6NX49 715 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 TUBA1AQ71U36 451 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 LUZP2Q86TE4 346 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 MDP1Q86V88 176 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 ALDH16A1Q8IZ83 802 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 TMEM203Q969S6 136 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 SPTSSAQ969W0 71 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 C12orf43Q96C57 262 aaKnown RBP13.16□□□□□ -0.3
PTPN20-206ENST00000395722 PDCD1LG2Q9BQ51 273 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 TMED9Q9BVK6 235 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 HDHD5Q9BXW7 423 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 ELOVL5Q9NYP7 299 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 SLC22A13Q9Y226 551 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 ZNF281Q9Y2X9 895 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 OR5H1A6NKK0 313 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 EEF1E1-BLOC1S5C9J1V9 151 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 M0R135 149 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 EEF1E1O43324 174 aaKnown RBP13.16□□□□□ -0.3
PTPN20-206ENST00000395722 HLA-DPB1P04440 258 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 DBHP09172 617 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 ACSM4P0C7M7 580 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 NR4A1P22736 598 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 FGF9P31371 208 aaPredicted RBP13.16□□□□□ -0.3
PTPN20-206ENST00000395722 ZNF121P58317 390 aaPredicted RBP13.16□□□□□ -0.3
PTPN20-206ENST00000395722 UBE2NP61088 152 aaKnown RBP13.16□□□□□ -0.3
PTPN20-206ENST00000395722 ADORA2A-AS1P86434 159 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 TLE1Q04724 770 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 DRAM2Q6UX65 266 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 TMEM91Q6ZNR0 172 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 ZNF584Q8IVC4 421 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 ELMOD2Q8IZ81 293 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 OR5AK2Q8NH90 309 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 PPP1R14AQ96A00 147 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 ZNF799Q96GE5 643 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 DCLRE1CQ96SD1 692 aaKnown RBP13.16□□□□□ -0.3
PTPN20-206ENST00000395722 CHCHD6Q9BRQ6 235 aa13.16□□□□□ -0.3
PTPN20-206ENST00000395722 KALRNO60229 2985 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 CCDC160A6NGH7 325 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 RGS9O75916 674 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-206ENST00000395722 HGFACQ04756 655 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 SOWAHCQ53LP3 525 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-206ENST00000395722 YIF1BQ5BJH7 314 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 BCL2L15Q5TBC7 163 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 MYO7BQ6PIF6 2116 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 ZNF283Q8N7M2 679 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 ABHD4Q8TB40 342 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 CENPOQ9BU64 300 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 PBOV1Q9GZY1 135 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 PCNX1Q96RV3 2341 aa13.15□□□□□ -0.3
PTPN20-206ENST00000395722 LOC100509620A0A075B734 347 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 TRBV5-5A0A0J9YX44 114 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 A0A1B0GUH1 482 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 F5H5K5 113 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 GABRPO00591 440 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 TTRP02766 147 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 ISG15P05161 165 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 CBR1P16152 277 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 ZNF14P17017 642 aaPredicted RBP13.14□□□□□ -0.31
PTPN20-206ENST00000395722 ANOS1P23352 680 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 IL32P24001 234 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 APEX1P27695 318 aaKnown RBP13.14□□□□□ -0.31
PTPN20-206ENST00000395722 TPTEP56180 551 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 GALK2Q01415 458 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 SLC25A35Q3KQZ1 300 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 UNQ9370/PRO34162Q6UXP9 181 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 FAM169BQ8N8A8 192 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 POM121L2Q96KW2 1035 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 COMMD4Q9H0A8 199 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 SSR3Q9UNL2 185 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 AMDHD2Q9Y303 409 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 RTTNQ86VV8 2226 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 B8ZZF3 427 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 SLC22A1O15245 554 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 NOL3O60936 208 aaKnown RBP13.14□□□□□ -0.31
PTPN20-206ENST00000395722 SERPINA5P05154 406 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 CHRNB4P30926 498 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 CCKARP32238 428 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 NCS1P62166 190 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 PLP2Q04941 152 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 FBXL19-AS1Q494R0 122 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 TIMM23BQ5SRD1 257 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 ZNF704Q6ZNC4 412 aaPredicted RBP13.14□□□□□ -0.31
PTPN20-206ENST00000395722 COLCA1Q6ZS62 124 aa13.14□□□□□ -0.31
PTPN20-206ENST00000395722 NAA40Q86UY6 237 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms