RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TPTEP56180 551 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 GGTLC2Q14390 218 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 TAF13Q15543 124 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 NKPD1Q17RQ9 610 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 SHEQ5VZ18 495 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 MBNL2Q5VZF2 373 aaKnown RBP17.04■□□□□ 0.32
SNCA-203ENST00000394986 SLC16A9Q7RTY1 509 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 GID4Q8IVV7 300 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 THEM6Q8WUY1 208 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 RNF133Q8WVZ7 376 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 Q96MF0 132 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 ZNF582Q96NG8 517 aaPredicted RBP17.04■□□□□ 0.32
SNCA-203ENST00000394986 TTTY10Q9BZA0 68 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 GMPPBQ9Y5P6 360 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 SLC22A31A6NKX4 558 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 APOL3O95236 402 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 LCATP04180 440 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 SLC2A1P11166 492 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 OTX1P32242 354 aaPredicted RBP17.04■□□□□ 0.32
SNCA-203ENST00000394986 SLC6A9P48067 706 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 PRSS12P56730 875 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 SELENOVP59797 346 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 HLXQ14774 488 aaPredicted RBP17.04■□□□□ 0.32
SNCA-203ENST00000394986 COLCA1Q6ZS62 124 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 RFLNBQ8N5W9 214 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 SPTSSAQ969W0 71 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 APOBEC3DQ96AK3 386 aaPredicted RBP17.04■□□□□ 0.32
SNCA-203ENST00000394986 CNN2Q99439 309 aaKnown RBP17.04■□□□□ 0.32
SNCA-203ENST00000394986 C1QTNF5Q9BXJ0 243 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 DCLRE1BQ9H816 532 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 FAM118AQ9NWS6 357 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 SMPD3Q9NY59 655 aaPredicted RBP17.04■□□□□ 0.32
SNCA-203ENST00000394986 COPS3Q9UNS2 423 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 N6AMT1Q9Y5N5 214 aa17.04■□□□□ 0.32
SNCA-203ENST00000394986 CELSR1Q9NYQ6 3014 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 ITPR3Q14573 2671 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 IGHV3-13P01766 116 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 OPRL1P41146 370 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 EFNA4P52798 201 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 PSG7Q13046 419 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 SNAI3Q3KNW1 292 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 OGFRL1Q5TC84 451 aaPredicted RBP17.03■□□□□ 0.32
SNCA-203ENST00000394986 ZNF454Q8N9F8 522 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 KCNJ15Q99712 375 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 YIPF3Q9GZM5 350 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 BARX1Q9HBU1 254 aaPredicted RBP17.03■□□□□ 0.32
SNCA-203ENST00000394986 ADGRL4Q9HBW9 690 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 LAMP5Q9UJQ1 280 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 ARFGEF3Q5TH69 2177 aa17.03■□□□□ 0.32
SNCA-203ENST00000394986 LOC100130705A0A1B0GUX0 176 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 TRIM64A6NGJ6 449 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 TRIM64BA6NI03 449 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 PRR32B1ATL7 298 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 PSMD9O00233 223 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 CASQ2O14958 399 aaPredicted RBP17.02■□□□□ 0.31
SNCA-203ENST00000394986 ALOX5APP20292 161 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 CLEC12BQ2HXU8 276 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 PRSS57Q6UWY2 283 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 LRRN1Q6UXK5 716 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 TGIF2LYQ8IUE0 185 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 C1orf174Q8IYL3 243 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 ENTHD1Q8IYW4 607 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 ZNF525Q8N782 197 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 ZNF283Q8N7M2 679 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 OR51G2Q8NGK0 314 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 CMBLQ96DG6 245 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 SLCO1C1Q9NYB5 712 aa17.02■□□□□ 0.31
SNCA-203ENST00000394986 H3BSA7 217 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 J3QW42 95 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 TIMM8AO60220 97 aaPredicted RBP17.01■□□□□ 0.31
SNCA-203ENST00000394986 ENTPD6O75354 484 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 F12P00748 615 aaPredicted RBP17.01■□□□□ 0.31
SNCA-203ENST00000394986 H2BFMP0C1H6 154 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 HSD11B1P28845 292 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 HTR1FP30939 366 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 CX3CR1P49238 355 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 GRB2P62993 217 aaKnown RBP17.01■□□□□ 0.31
SNCA-203ENST00000394986 DRAM2Q6UX65 266 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 SLC35F2Q8IXU6 374 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 OR2AE1Q8NHA4 323 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 TRUB1Q8WWH5 349 aaKnown RBP17.01■□□□□ 0.31
SNCA-203ENST00000394986 RAB1BQ9H0U4 201 aa17.01■□□□□ 0.31
SNCA-203ENST00000394986 ZSCAN5BA6NJL1 495 aa17■□□□□ 0.31
SNCA-203ENST00000394986 NCR1O76036 304 aa17■□□□□ 0.31
SNCA-203ENST00000394986 CLIC3O95833 236 aa17■□□□□ 0.31
SNCA-203ENST00000394986 GABRB1P18505 474 aa17■□□□□ 0.31
SNCA-203ENST00000394986 SLC15A1P46059 708 aa17■□□□□ 0.31
SNCA-203ENST00000394986 MMP15P51511 669 aa17■□□□□ 0.31
SNCA-203ENST00000394986 SNRPGP62308 76 aaKnown RBP17■□□□□ 0.31
SNCA-203ENST00000394986 OR2T2Q6IF00 324 aa17■□□□□ 0.31
SNCA-203ENST00000394986 ZNF771Q7L3S4 317 aaPredicted RBP17■□□□□ 0.31
SNCA-203ENST00000394986 OR5AS1Q8N127 324 aa17■□□□□ 0.31
SNCA-203ENST00000394986 PACRGLQ8N7B6 248 aa17■□□□□ 0.31
SNCA-203ENST00000394986 OR5L1Q8NGL2 311 aa17■□□□□ 0.31
SNCA-203ENST00000394986 SNX33Q8WV41 574 aa17■□□□□ 0.31
SNCA-203ENST00000394986 COG8Q96MW5 612 aa17■□□□□ 0.31
SNCA-203ENST00000394986 RDH12Q96NR8 316 aa17■□□□□ 0.31
SNCA-203ENST00000394986 MS4A5Q9H3V2 200 aa17■□□□□ 0.31
SNCA-203ENST00000394986 BRD7Q9NPI1 651 aa17■□□□□ 0.31
SNCA-203ENST00000394986 WARS2Q9UGM6 360 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms