RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 LYG2Q86SG7 212 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 FJX1Q86VR8 437 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 LINC00346Q8IVM7 164 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 ESX1Q8N693 406 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 PPP1R1CQ8WVI7 109 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 CST11Q9H112 138 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 SLC2A8Q9NY64 477 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 LOC100509620A0A075B734 347 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 TDGF1P13385 188 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 RAB6AP20340 208 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 DLSTP36957 453 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 SLC26A5P58743 744 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 CXADRP78310 365 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 FMODQ06828 376 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 PPP1R1AQ13522 171 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 ATXN7L3Q14CW9 347 aaPredicted RBP16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 CDNFQ49AH0 187 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 HLA-DQA1Q5Y7H0 255 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 OR2W3Q7Z3T1 314 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 DCXRQ7Z4W1 244 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 TRAPPC6BQ86SZ2 158 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 WDFY1Q8IWB7 410 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 MAML2Q8IZL2 1156 aaPredicted RBP16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 SLC26A10Q8NG04 563 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 GPR119Q8TDV5 335 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 ST7LQ8TDW4 575 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 DNASE2BQ8WZ79 361 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 CMBLQ96DG6 245 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 LRRC46Q96FV0 321 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 TAS2R3Q9NYW6 316 aa16.38■□□□□ 0.21
PCDHA1-202ENST00000394633 TLCD2A6NGC4 264 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 RAB27BO00194 218 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 P2RY10O00398 339 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 TO15178 435 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 HLA-GP17693 338 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 CNR1P21554 472 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 ABCD3P28288 659 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 CAPZA1P52907 286 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 RNASE10Q5GAN6 216 aaKnown RBP16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 GVQW1Q8N7I0 195 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 NKAIN3Q8N8D7 197 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 BPIFCQ8NFQ6 507 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 PRRT1Q99946 306 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 ZNF471Q9BX82 626 aaPredicted RBP16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 WWTR1Q9GZV5 400 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 DUSP15Q9H1R2 295 aaPredicted RBP16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 IFT46Q9NQC8 304 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 CPED1A4D0V7 1026 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 LILRA5A6NI73 299 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 AHSA1O95433 338 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 ZNF823P16415 610 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 NXPH1P58417 271 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 SLC22A6Q4U2R8 563 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 VWA2Q5GFL6 755 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 OR52W1Q6IF63 320 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 ACOT7LQ6ZUV0 252 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 GRINAQ7Z429 371 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 IQCF2Q8IXL9 164 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 PAQR4Q8N4S7 273 aaPredicted RBP16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 ASXL3Q9C0F0 2248 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 CNTD2Q9H8S5 307 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 DHCR7Q9UBM7 475 aaKnown RBP16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 RAB22AQ9UL26 194 aa16.37■□□□□ 0.21
PCDHA1-202ENST00000394633 SEC16AO15027 2179 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 WDFY3Q8IZQ1 3526 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 TMEM269A0A1B0GVZ9 245 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 C9orf170A2RU37 121 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 FTCDNL1E5RQL4 147 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 H3BMH7 237 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 IL2RAP01589 272 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 GP1BAP07359 652 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 PPIAP62937 165 aaKnown RBP16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 PRAMEF17Q5VTA0 474 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 TMEM244Q5VVB8 128 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 ZNF704Q6ZNC4 412 aaPredicted RBP16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 LMX1AQ8TE12 382 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 IER2Q9BTL4 223 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 PLEKHA6Q9Y2H5 1048 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 CFAP54Q96N23 3096 aa16.36■□□□□ 0.21
PCDHA1-202ENST00000394633 FAM74A7A6NL05 159 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 SULT2B1O00204 365 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 BCAT2O15382 392 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 FADS1O60427 444 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 MPZP25189 248 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 CD96P40200 585 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 ARHGDIBP52566 201 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 DEFA5Q01523 94 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 UNC119Q13432 240 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 FAM74A3Q4VXF1 159 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 TMEM17Q86X19 198 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 ZDHHC22Q8N966 263 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 MITD1Q8WV92 249 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 NUDCD2Q8WVJ2 157 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 FGGYQ96C11 551 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 PHYHIPLQ96FC7 376 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 UCK1Q9HA47 277 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 IGKV1D-43A0A0B4J1Z2 117 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 METTL21EPA6NDL7 271 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 MS4A18H0YCH9 400 aa16.35■□□□□ 0.21
PCDHA1-202ENST00000394633 PLATP00750 562 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms