RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SYNGR4O95473 234 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 RFX2P48378 723 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 CX3CR1P49238 355 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 TAF13Q15543 124 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 TAB1Q15750 504 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 PLXDC2Q6UX71 529 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 OR8B12Q8NGG6 310 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 CNTNAP3BQ96NU0 1288 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 ABHD1Q96SE0 405 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 CNTNAP3Q9BZ76 1288 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 LINC00470Q9BZP3 86 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 DEFB127Q9H1M4 99 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 GPR35Q9HC97 309 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 ZNF275Q9NSD4 429 aaPredicted RBP13.15□□□□□ -0.3
CCT4-201ENST00000394440 ZNF319Q9P2F9 582 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 SPRR3Q9UBC9 169 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 TRGV5A0A0B4J1U4 118 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 PLA2G10O15496 165 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 CST2P09228 141 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 CPN1P15169 458 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 NR4A2P43354 598 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 C3AR1Q16581 482 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 RSPO1Q2MKA7 263 aaPredicted RBP13.14□□□□□ -0.31
CCT4-201ENST00000394440 CMTM4Q8IZR5 234 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 TRIM63Q969Q1 353 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 FOXB1Q99853 325 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 ABCG5Q9H222 651 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 STEAP1Q9UHE8 339 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 SLC5A6Q9Y289 635 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 NOSIPQ9Y314 301 aaKnown RBP13.14□□□□□ -0.31
CCT4-201ENST00000394440 ETV7Q9Y603 341 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 ZNF724A8MTY0 619 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 UBL3O95164 117 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 CCL1P22362 96 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 PMP22Q01453 160 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 CEACAM16Q2WEN9 425 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 ELFN2Q5R3F8 820 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 CCBE1Q6UXH8 406 aaPredicted RBP13.14□□□□□ -0.31
CCT4-201ENST00000394440 NRARPQ7Z6K4 114 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 LYPD6Q86Y78 171 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 DTX3Q8N9I9 347 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 WDYHV1Q96HA8 205 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 SLCO5A1Q9H2Y9 848 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 EMC3Q9P0I2 261 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 CKLFQ9UBR5 152 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 CLEC4AQ9UMR7 237 aa13.14□□□□□ -0.31
CCT4-201ENST00000394440 SLC17A2O00624 439 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 PFDN1O60925 122 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 IGLV3-1P01715 115 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 IGHG3P01860 377 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 ITGA5P08648 1049 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 SLC2A1P11166 492 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 C11orf91Q3C1V1 193 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 TSPO2Q5TGU0 170 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 BAIAP2L2Q6UXY1 529 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.13□□□□□ -0.31
CCT4-201ENST00000394440 TUSC5Q8IXB3 177 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 OR51A2Q8NGJ7 313 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 C11orf54Q9H0W9 315 aaPredicted RBP13.13□□□□□ -0.31
CCT4-201ENST00000394440 AKAP13Q12802 2813 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 TRAV17A0A0B4J275 112 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 SYT7O43581 403 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 MRPL33O75394 65 aaKnown RBP13.13□□□□□ -0.31
CCT4-201ENST00000394440 STK11Q15831 433 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 TRIQKQ629K1 86 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 ZNF283Q8N7M2 679 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 OR51E1Q8TCB6 317 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 CAMK2AQ9UQM7 478 aa13.13□□□□□ -0.31
CCT4-201ENST00000394440 LOC390937A0A1W2PQ73 354 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 B4GALT1P15291 398 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 CRYGSP22914 178 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 NRN1LQ496H8 165 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 ZNF529Q6P280 563 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 PLPP7Q8NBV4 271 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 OR1J2Q8NGS2 313 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 ADAT3Q96EY9 351 aaPredicted RBP13.12□□□□□ -0.31
CCT4-201ENST00000394440 LDAHQ9H6V9 325 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 PARPBPQ9NWS1 579 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 RHBDD3Q9Y3P4 386 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 MED12LQ86YW9 2145 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 MEGF11A6BM72 1044 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 E9PLN8 166 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 RPL36A-HNRNPH2H7BZ11 118 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 MMP15P51511 669 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 GALK2Q01415 458 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 RAB35Q15286 201 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 RNPS1Q15287 305 aaKnown RBP13.12□□□□□ -0.31
CCT4-201ENST00000394440 SLC22A24Q8N4F4 322 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 RAB40AQ8WXH6 277 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 SLC25A28Q96A46 364 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 HAVCR1Q96D42 359 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 SOX7Q9BT81 388 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 HDHD2Q9H0R4 259 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 SLC17A5Q9NRA2 495 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 SLC7A10Q9NS82 523 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 PLEK2Q9NYT0 353 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 RABL2AQ9UBK7 228 aaPredicted RBP13.12□□□□□ -0.31
CCT4-201ENST00000394440 KLK13Q9UKR3 277 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 RABL2BQ9UNT1 228 aa13.12□□□□□ -0.31
CCT4-201ENST00000394440 A0A1B0GVI7 797 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms