RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ELOVL3Q9HB03 270 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 KRT84Q9NSB2 600 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 CENPMQ9NSP4 180 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 TBCCD1Q9NVR7 557 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 SLCO1C1Q9NYB5 712 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 TVP23BQ9NYZ1 205 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 KCNG2Q9UJ96 466 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 OAZ3Q9UMX2 235 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 N6AMT1Q9Y5N5 214 aa6.53□□□□□ -1.36
HMGB3P1-201ENST00000393368 HEATR1Q9H583 2144 aaKnown RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 IGHV3-64DA0A0J9YX35 117 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 PLSCR5A0PG75 271 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 PRR23D1E9PI22 279 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 M0R135 149 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 NDUFS8O00217 210 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 EBAG9O00559 213 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 CD5LO43866 347 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 PRKYO43930 277 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 RP2O75695 350 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 GLCEO94923 617 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 LCATP04180 440 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 MRPL3P09001 348 aaKnown RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 PRR23D2P0DMB1 279 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 IGHV4-31P0DP07 118 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 HOXB6P17509 224 aaKnown RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 GSTT1P30711 240 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 POLR2IP36954 125 aaKnown RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 SLC6A9P48067 706 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 PRKXP51817 358 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 HCCSP53701 268 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 CRISP1P54107 249 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 ACTR3P61158 418 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 RPS7P62081 194 aaKnown RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 LOXL1Q08397 574 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 RIN1Q13671 783 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 EIF2B1Q14232 305 aaKnown RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 PTGES3Q15185 160 aaKnown RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 SNAPC1Q16533 368 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 SNAI3Q3KNW1 292 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 ARL9Q6T311 187 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 Q6ZR03 302 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 USP51Q70EK9 711 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 CXXC5Q7LFL8 322 aaKnown RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 DPY19L4Q7Z388 723 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 HIPK1Q86Z02 1210 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 BHLHE23Q8NDY6 225 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 OR2Z1Q8NG97 314 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 OR10AD1Q8NGE0 317 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 OR6N2Q8NGY6 317 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 OR2AE1Q8NHA4 323 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 ST7LQ8TDW4 575 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 RDH5Q92781 318 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 SLAMF6Q96DU3 332 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 NRBF2Q96F24 287 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF799Q96GE5 643 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 INTS14Q96SY0 518 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 CIB1Q99828 191 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 COPS4Q9BT78 406 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 TTTY10Q9BZA0 68 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 GABARAPL1Q9H0R8 117 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 SAP30LQ9HAJ7 183 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 SLC25A19Q9HC21 320 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 MYOZ1Q9NP98 299 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 YAE1D1Q9NRH1 226 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF275Q9NSD4 429 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 DECR2Q9NUI1 292 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 DCAF16Q9NXF7 216 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 PURGQ9UJV8 347 aaKnown RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 FBXO9Q9UK97 447 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 KLHDC2Q9Y2U9 406 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 ARFGEF3Q5TH69 2177 aa6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 NIPBLQ6KC79 2804 aaeCLIP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 SETD2Q9BYW2 2564 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P1-201ENST00000393368 CR1P17927 2039 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 CCDC182A6NF36 153 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 H0YL77 283 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 PPIHO43447 177 aaKnown RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 MT-ND5P03915 603 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 HMGN1P05114 100 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 FCGR1AP12314 374 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 SELEP16581 610 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 PAICSP22234 425 aaKnown RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 ACHEP22303 614 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 SLC2A5P22732 501 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 IGFBP5P24593 272 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 GIFP27352 417 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 GPR6P46095 362 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 RIPPLY3P57055 190 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 MVKQ03426 396 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 APOFQ13790 326 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 GK2Q14410 553 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 TAF13Q15543 124 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 PCK2Q16822 640 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 PCGF3Q3KNV8 242 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 GLYATL3Q5SZD4 288 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 C6orf52Q5T4I8 152 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 KDM4DQ6B0I6 523 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 UNQ6126/PRO20091Q6UXV3 157 aa6.51□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZDHHC13Q8IUH4 622 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms